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The map label for this gene is yjiL [C]

Identifier: 15668176

GI number: 15668176

Start: 5378

End: 6109

Strand: Direct

Name: yjiL [C]

Synonym: MJ0004

Alternate gene names: 15668176

Gene position: 5378-6109 (Clockwise)

Preceding gene: 15668175

Following gene: 15668179

Centisome position: 0.32

GC content: 31.56

Gene sequence:

>732_bases
ATGATTTTAGGGATAGATGTTGGATCTACAACAACGAAGATGGTTCTAATGGAAGATAGCAAGATAATTTGGTATAAGAT
AGAGGATATTGGAGTTGTTATTGAGGAAGATATTTTATTAAAAATGGTTAAGGAGATTGAACAAAAATATCCAATAGATA
AAATCGTTGCAACTGGATATGGAAGGCATAAGGTTAGTTTTGCAGATAAGATAGTTCCAGAAGTTATTGCATTGGGAAAA
GGAGCTAACTATTTCTTTAACGAGGCAGATGGAGTTATAGACATTGGAGGGCAAGATACAAAGGTCTTAAAGATTGATAA
AAACGGAAAAGTTGTTGATTTTATCCTATCAGATAAATGTGCCGCTGGAACTGGAAAATTCTTAGAAAAGGCATTAGATA
TTTTAAAAATTGATAAAAATGAGATAAATAAATACAAATCAGATAATATCGCTAAAATATCTTCAATGTGTGCTGTCTTT
GCTGAAAGTGAGATAATAAGCTTACTATCAAAAAAAGTTCCAAAGGAAGGCATTTTAATGGGCGTCTATGAGAGTATAAT
AAATAGGGTTATCCCAATGACCAATAGGCTTAAAATTCAAAACATAGTGTTTAGTGGAGGAGTTGCTAAAAATAAGGTTT
TGGTTGAGATGTTTGAGAAAAAATTGAATAAAAAACTACTAATTCCAAAAGAACCACAGATTGTTTGCTGTGTTGGAGCT
ATATTGGTTTAA

Upstream 100 bases:

>100_bases
AAGAGGTTGAAAAATTAAATATCATCATTAAAGCAATAGAATATCCAAAAAATGAAAAAGATTACAATAAATTTGTAAAA
ACTTTAGAGAAGATGATAAA

Downstream 100 bases:

>100_bases
TTTACCTCTCAATATTAAATAGTGGTGGCAAACTGTTATCTACTCCCGGGATATAGCCTAATGTGTCTCTTATTTTTAGC
TGCATTCTATGGAATATGTA

Product: (R)-2-hydroxyglutaryl-CoA dehydratase activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MILGIDVGSTTTKMVLMEDSKIIWYKIEDIGVVIEEDILLKMVKEIEQKYPIDKIVATGYGRHKVSFADKIVPEVIALGK
GANYFFNEADGVIDIGGQDTKVLKIDKNGKVVDFILSDKCAAGTGKFLEKALDILKIDKNEINKYKSDNIAKISSMCAVF
AESEIISLLSKKVPKEGILMGVYESIINRVIPMTNRLKIQNIVFSGGVAKNKVLVEMFEKKLNKKLLIPKEPQIVCCVGA
ILV

Sequences:

>Translated_243_residues
MILGIDVGSTTTKMVLMEDSKIIWYKIEDIGVVIEEDILLKMVKEIEQKYPIDKIVATGYGRHKVSFADKIVPEVIALGK
GANYFFNEADGVIDIGGQDTKVLKIDKNGKVVDFILSDKCAAGTGKFLEKALDILKIDKNEINKYKSDNIAKISSMCAVF
AESEIISLLSKKVPKEGILMGVYESIINRVIPMTNRLKIQNIVFSGGVAKNKVLVEMFEKKLNKKLLIPKEPQIVCCVGA
ILV
>Mature_243_residues
MILGIDVGSTTTKMVLMEDSKIIWYKIEDIGVVIEEDILLKMVKEIEQKYPIDKIVATGYGRHKVSFADKIVPEVIALGK
GANYFFNEADGVIDIGGQDTKVLKIDKNGKVVDFILSDKCAAGTGKFLEKALDILKIDKNEINKYKSDNIAKISSMCAVF
AESEIISLLSKKVPKEGILMGVYESIINRVIPMTNRLKIQNIVFSGGVAKNKVLVEMFEKKLNKKLLIPKEPQIVCCVGA
ILV

Specific function: Unknown

COG id: COG1924

COG function: function code I; Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082426, Length=249, Percent_Identity=36.144578313253, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y004_METJA (Q60315)

Other databases:

- EMBL:   L77117
- PIR:   D64300
- RefSeq:   NP_246967.1
- ProteinModelPortal:   Q60315
- GeneID:   1450843
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0004
- NMPDR:   fig|243232.1.peg.4
- TIGR:   MJ0004
- HOGENOM:   HBG661144
- OMA:   ANYFFKD
- ProtClustDB:   CLSK876030
- BioCyc:   MJAN243232:MJ_0004-MONOMER
- InterPro:   IPR002731
- InterPro:   IPR008275
- TIGRFAMs:   TIGR00241

Pfam domain/function: PF01869 BcrAD_BadFG

EC number: NA

Molecular weight: Translated: 26897; Mature: 26897

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILGIDVGSTTTKMVLMEDSKIIWYKIEDIGVVIEEDILLKMVKEIEQKYPIDKIVATGY
CEEEEECCCCCEEEEEEECCEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCHHHHHHCCC
GRHKVSFADKIVPEVIALGKGANYFFNEADGVIDIGGQDTKVLKIDKNGKVVDFILSDKC
CCEEHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEEEEEECCCC
AAGTGKFLEKALDILKIDKNEINKYKSDNIAKISSMCAVFAESEIISLLSKKVPKEGILM
CCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GVYESIINRVIPMTNRLKIQNIVFSGGVAKNKVLVEMFEKKLNKKLLIPKEPQIVCCVGA
HHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCEECCCCCCCEEEEECH
ILV
HCC
>Mature Secondary Structure
MILGIDVGSTTTKMVLMEDSKIIWYKIEDIGVVIEEDILLKMVKEIEQKYPIDKIVATGY
CEEEEECCCCCEEEEEEECCEEEEEEEECCCEEEHHHHHHHHHHHHHHHCCHHHHHHCCC
GRHKVSFADKIVPEVIALGKGANYFFNEADGVIDIGGQDTKVLKIDKNGKVVDFILSDKC
CCEEHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCEEEEECCCCCEEEEEECCCC
AAGTGKFLEKALDILKIDKNEINKYKSDNIAKISSMCAVFAESEIISLLSKKVPKEGILM
CCCCHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
GVYESIINRVIPMTNRLKIQNIVFSGGVAKNKVLVEMFEKKLNKKLLIPKEPQIVCCVGA
HHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCEECCCCCCCEEEEECH
ILV
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087