| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15668175
Identifier: 15668175
GI number: 15668175
Start: 4911
End: 5381
Strand: Direct
Name: 15668175
Synonym: MJ0003
Alternate gene names: NA
Gene position: 4911-5381 (Clockwise)
Preceding gene: NA
Following gene: 15668176
Centisome position: 0.29
GC content: 26.54
Gene sequence:
>471_bases ATGAAAGGAAAAAGAATAGCCATTGTTTCTCATCGCATATTAAATCAAAATAGTGTTGTTAATGGGTTGGAAAGGGCTGA AGGAGCTTTTAATGAAGTTGTTGAGATTCTTTTAAAGAATAATTATGGAATAATACAACTTCCATGTCCAGAGTTGATTT ATTTGGGAATTGATAGAGAAGGAAAAACAAAAGAGGAATATGACACAAAGGAATACAGAGAACTTTGCAAAAAACTTTTG GAACCAATAATCAAATATCTGCAAGAATATAAAAAAGACAACTATAAATTTATCTTAATTGGGATAGAAAACTCTACAAC TTGTGATATTTTTAAAAATAGAGGAATTTTGATGGAAGAATTTTTTAAAGAGGTTGAAAAATTAAATATCATCATTAAAG CAATAGAATATCCAAAAAATGAAAAAGATTACAATAAATTTGTAAAAACTTTAGAGAAGATGATAAAATGA
Upstream 100 bases:
>100_bases TGTACTTTATTTATATATTCTCATAAGGTATTGAATATCAAAAGTCATCAACTTTCCTTAAAAATTTATTTCTCTTAACA TTCTATTAAATTGTGAGAGT
Downstream 100 bases:
>100_bases TTTTAGGGATAGATGTTGGATCTACAACAACGAAGATGGTTCTAATGGAAGATAGCAAGATAATTTGGTATAAGATAGAG GATATTGGAGTTGTTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKGKRIAIVSHRILNQNSVVNGLERAEGAFNEVVEILLKNNYGIIQLPCPELIYLGIDREGKTKEEYDTKEYRELCKKLL EPIIKYLQEYKKDNYKFILIGIENSTTCDIFKNRGILMEEFFKEVEKLNIIIKAIEYPKNEKDYNKFVKTLEKMIK
Sequences:
>Translated_156_residues MKGKRIAIVSHRILNQNSVVNGLERAEGAFNEVVEILLKNNYGIIQLPCPELIYLGIDREGKTKEEYDTKEYRELCKKLL EPIIKYLQEYKKDNYKFILIGIENSTTCDIFKNRGILMEEFFKEVEKLNIIIKAIEYPKNEKDYNKFVKTLEKMIK >Mature_156_residues MKGKRIAIVSHRILNQNSVVNGLERAEGAFNEVVEILLKNNYGIIQLPCPELIYLGIDREGKTKEEYDTKEYRELCKKLL EPIIKYLQEYKKDNYKFILIGIENSTTCDIFKNRGILMEEFFKEVEKLNIIIKAIEYPKNEKDYNKFVKTLEKMIK
Specific function: Unknown
COG id: COG5418
COG function: function code S; Predicted secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y003_METJA (Q60313)
Other databases:
- EMBL: L77117 - PIR: C64300 - RefSeq: NP_246966.1 - GeneID: 1450842 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0003 - NMPDR: fig|243232.1.peg.3 - TIGR: MJ0003 - HOGENOM: HBG306023 - OMA: TESIMEI - ProtClustDB: CLSK876029 - BioCyc: MJAN243232:MJ_0003-MONOMER - InterPro: IPR007553
Pfam domain/function: PF04463 DUF523
EC number: NA
Molecular weight: Translated: 18429; Mature: 18429
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKRIAIVSHRILNQNSVVNGLERAEGAFNEVVEILLKNNYGIIQLPCPELIYLGIDRE CCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC GKTKEEYDTKEYRELCKKLLEPIIKYLQEYKKDNYKFILIGIENSTTCDIFKNRGILMEE CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCHHHH FFKEVEKLNIIIKAIEYPKNEKDYNKFVKTLEKMIK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC >Mature Secondary Structure MKGKRIAIVSHRILNQNSVVNGLERAEGAFNEVVEILLKNNYGIIQLPCPELIYLGIDRE CCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCC GKTKEEYDTKEYRELCKKLLEPIIKYLQEYKKDNYKFILIGIENSTTCDIFKNRGILMEE CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHCCCCHHHH FFKEVEKLNIIIKAIEYPKNEKDYNKFVKTLEKMIK HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087