| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 30995460
Identifier: 30995460
GI number: 30995460
Start: 1668718
End: 1669158
Strand: Reverse
Name: 30995460
Synonym: HI1602
Alternate gene names: NA
Gene position: 1669158-1668718 (Counterclockwise)
Preceding gene: 16273500
Following gene: 16273491
Centisome position: 91.2
GC content: 35.83
Gene sequence:
>441_bases ATGCAAGGTATCGGCAGTGGCGTAAGTTTATTGATTTTACGCTTTTTTCTCGCATGGGAGTTTTTTGAATCAGGATTAGA AAAATGGAATGGACAAAATTGGTTCGCTGAAATACAAGATCGTTTTCCTTTTCCATTTAATCTTATTCCTGCCGATATTA ATTGGCACGTTGCAATGGGATCAGAATTAATTTTCCCATTCTTGCTGATATTTGGGGTGCTAACACGTTTTAGTGCATTA AGTTTAACGATTTTAATCTCTGTCGCGTGGTATAGCATTCACGCCGATTCAGGTTATAACGTATGTGATAATGGTTATAA ATTACCATTAATTTATGTGGTGACTTTATTAATCTTAATTACGCAGGGAGCGGGGAAACTCTCTTTAGACACGCTTATTA AGAAGGTTTATCCAACTAAAAGCTGGTTGAAATTTCTCTAA
Upstream 100 bases:
>100_bases ACTGGGTAATATTTCCTAGTGTGGTAAGATAAGTAACTCAATACACTTTTCGCTTTAAAAGCGAGAAAATTTGAAAGGTA AAAAAATGAAGGATTGTAAG
Downstream 100 bases:
>100_bases TTATTTATTCAAAATTCAAACTCTAGGAGATTATTCAAATGAAAAAATTAGCAACATTAACAGCATTAGCAGGTGCATTA ACGATGGCAGTAGCGACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MQGIGSGVSLLILRFFLAWEFFESGLEKWNGQNWFAEIQDRFPFPFNLIPADINWHVAMGSELIFPFLLIFGVLTRFSAL SLTILISVAWYSIHADSGYNVCDNGYKLPLIYVVTLLILITQGAGKLSLDTLIKKVYPTKSWLKFL
Sequences:
>Translated_146_residues MQGIGSGVSLLILRFFLAWEFFESGLEKWNGQNWFAEIQDRFPFPFNLIPADINWHVAMGSELIFPFLLIFGVLTRFSAL SLTILISVAWYSIHADSGYNVCDNGYKLPLIYVVTLLILITQGAGKLSLDTLIKKVYPTKSWLKFL >Mature_146_residues MQGIGSGVSLLILRFFLAWEFFESGLEKWNGQNWFAEIQDRFPFPFNLIPADINWHVAMGSELIFPFLLIFGVLTRFSAL SLTILISVAWYSIHADSGYNVCDNGYKLPLIYVVTLLILITQGAGKLSLDTLIKKVYPTKSWLKFL
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the doxX family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1602_HAEIN (P44270)
Other databases:
- EMBL: L42023 - PIR: A64038 - RefSeq: NP_439744.2 - GeneID: 950457 - GenomeReviews: L42023_GR - KEGG: hin:HI1602 - TIGR: HI_1602 - HOGENOM: HBG706937 - OMA: YKLPLIY - ProtClustDB: CLSK868449 - BioCyc: HINF71421:HI_1602-MONOMER - InterPro: IPR011637
Pfam domain/function: PF07681 DoxX
EC number: NA
Molecular weight: Translated: 16612; Mature: 16612
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xec92b70)-; HASH(0xecba8e0)-; HASH(0xe890360)-; HASH(0xe45e6c0)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGIGSGVSLLILRFFLAWEFFESGLEKWNGQNWFAEIQDRFPFPFNLIPADINWHVAMG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCEEEEECC SELIFPFLLIFGVLTRFSALSLTILISVAWYSIHADSGYNVCDNGYKLPLIYVVTLLILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHH TQGAGKLSLDTLIKKVYPTKSWLKFL HCCCCCCCHHHHHHHHCCCHHHHHCH >Mature Secondary Structure MQGIGSGVSLLILRFFLAWEFFESGLEKWNGQNWFAEIQDRFPFPFNLIPADINWHVAMG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEECCCCEEEEECC SELIFPFLLIFGVLTRFSALSLTILISVAWYSIHADSGYNVCDNGYKLPLIYVVTLLILI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHH TQGAGKLSLDTLIKKVYPTKSWLKFL HCCCCCCCHHHHHHHHCCCHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800