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The map label for this gene is yfcN [C]

Identifier: 30995431

GI number: 30995431

Start: 1268132

End: 1268656

Strand: Direct

Name: yfcN [C]

Synonym: HI1202

Alternate gene names: 30995431

Gene position: 1268132-1268656 (Clockwise)

Preceding gene: 16273120

Following gene: 16273125

Centisome position: 69.29

GC content: 37.71

Gene sequence:

>525_bases
TTGAAAATTAATGAGAAAAAAATGCAAGACGAATTTGATTTATTCCGCACGGAAACCAAAGGCATTAAGCCAATTAAACA
AGATACTTTTGTGGCCCCCCGCCAAAAACGTGATCAGAAAAAAATAGAATTGAAAGAATTACGAGCGAAAGAAGATACAT
TGTTCTATTTTTCTGATGAATATGAGCCATTACTGAATGACAATGATGGTGTTGTGAAATATTTACGTGATGGGGAAGAT
TCCCATTTATTAAAACAACTTCGTCGTGGAGATTTTTCGCCAGAATTGTTTTTAGATTTACACGGTTTAACCCGTGAACA
AGCTAAGCAAGAATTAGCTGCACTTTTACTGGCTTGTGAAAATGAGCATGTTGATTGTGCCAGCATTATGACGGGCTATG
GCACCTTTACATTGAAAAAACAAATTCCACGTTGGCTAGTACAACATCCTAAAGTGCGGGCATTACATCAAGCACCAAGG
GAGTGGGGCGGTGAAGCTGCAATTTTGATTTTAGTCGATTTGTAA

Upstream 100 bases:

>100_bases
CATAAAAGTGAGTAGAAAAGTTAGCATAAAATTAGGTATGAAAATTTGGCGTAGTTATACCACAGATGAGAATGTAGAAC
TATGATATGATACGCAAAAT

Downstream 100 bases:

>100_bases
AAAACGTTATAAAAAATACCGCACTTTTACTGCTAGGGCAAAGTGCGGTATTTTCTTTTATGTTTTTACTTGAATTATTG
TGTTGCTTGAATTGCGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKINEKKMQDEFDLFRTETKGIKPIKQDTFVAPRQKRDQKKIELKELRAKEDTLFYFSDEYEPLLNDNDGVVKYLRDGED
SHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPR
EWGGEAAILILVDL

Sequences:

>Translated_174_residues
MKINEKKMQDEFDLFRTETKGIKPIKQDTFVAPRQKRDQKKIELKELRAKEDTLFYFSDEYEPLLNDNDGVVKYLRDGED
SHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPR
EWGGEAAILILVDL
>Mature_174_residues
MKINEKKMQDEFDLFRTETKGIKPIKQDTFVAPRQKRDQKKIELKELRAKEDTLFYFSDEYEPLLNDNDGVVKYLRDGED
SHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACENEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPR
EWGGEAAILILVDL

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=162, Percent_Identity=53.0864197530864, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20266; Mature: 20266

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINEKKMQDEFDLFRTETKGIKPIKQDTFVAPRQKRDQKKIELKELRAKEDTLFYFSDE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
YEPLLNDNDGVVKYLRDGEDSHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACE
CCCCCCCCCCEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHC
NEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAAILILVDL
CCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEEEEEC
>Mature Secondary Structure
MKINEKKMQDEFDLFRTETKGIKPIKQDTFVAPRQKRDQKKIELKELRAKEDTLFYFSDE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
YEPLLNDNDGVVKYLRDGEDSHLLKQLRRGDFSPELFLDLHGLTREQAKQELAALLLACE
CCCCCCCCCCEEHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHC
NEHVDCASIMTGYGTFTLKKQIPRWLVQHPKVRALHQAPREWGGEAAILILVDL
CCCCCHHHHHHCCCCEEHHHHHHHHHHCCCCHHHHHHCHHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]