| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is yfbV [C]
Identifier: 16273125
GI number: 16273125
Start: 1272354
End: 1272797
Strand: Direct
Name: yfbV [C]
Synonym: HI1205
Alternate gene names: 16273125
Gene position: 1272354-1272797 (Clockwise)
Preceding gene: 30995431
Following gene: 16273126
Centisome position: 69.52
GC content: 37.39
Gene sequence:
>444_bases ATGGCATTTTTTTCCATTTTTAAACAGGGGCAAATTTATCTTAATACTTGGCCGCTGGAGGCGAAGTTAGGCATTATTTT CCCTGAAAACCGTATTATGAAAGCCACGAGTTTTGCACAAAAATTTATGCCTTTTGTTGCTGTGTTTGCAATTCTATGGC AGCAGTTTTATGCAAAAAATGATTTGATGGCATTTTCTATCGCAATTTTGACCGCACTTTTTGCCTTGCTTATTCCTTTT CAAGGTCTTTATTGGCTTGGTAAGCGTGCCAATACGCCGTTAGAAAATCAAAGTGCGGTATGGTTTTATGATATTTGCGA ACGTTTAAAACAACTACATGAACCCTTGCCTTTTGTGCAAGAAAAACCGACATACCAACATTTAGCGGAAGTCTTAAAGA AAGCTCAAAGTAAATTGGAACGTGCTTTTTGGCAGGAAATTTAG
Upstream 100 bases:
>100_bases ATACAAACTTTATCGTATTTTTTGAAAAATTAAACTATTTTTACTAAAAATAGACTTAAAATAGCGTATGATAAGTGCGG TCAATTTTTGAGGTGTTTTT
Downstream 100 bases:
>100_bases TTTACGCAAACGTTTTCTTTTTGGCTTTATTTTTGTAGAATAGCTCGGTCGTTTTAAACGGCCGTTTTTCATTGAGAGAT TTTTTAATGATCGATTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MAFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKNDLMAFSIAILTALFALLIPF QGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQEKPTYQHLAEVLKKAQSKLERAFWQEI
Sequences:
>Translated_147_residues MAFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKNDLMAFSIAILTALFALLIPF QGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQEKPTYQHLAEVLKKAQSKLERAFWQEI >Mature_146_residues AFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKNDLMAFSIAILTALFALLIPFQ GLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQEKPTYQHLAEVLKKAQSKLERAFWQEI
Specific function: Unknown
COG id: COG3092
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0208 family
Homologues:
Organism=Escherichia coli, GI1788632, Length=145, Percent_Identity=44.1379310344828, Blast_Score=126, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1205_HAEIN (P44127)
Other databases:
- EMBL: L42023 - PIR: A64022 - RefSeq: NP_439361.1 - GeneID: 950166 - GenomeReviews: L42023_GR - KEGG: hin:HI1205 - NMPDR: fig|71421.1.peg.1152 - TIGR: HI_1205 - HOGENOM: HBG297010 - OMA: FACSLPM - ProtClustDB: PRK01816 - BioCyc: HINF71421:HI_1205-MONOMER - HAMAP: MF_01101 - InterPro: IPR007334
Pfam domain/function: PF04217 DUF412
EC number: NA
Molecular weight: Translated: 17271; Mature: 17139
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe25b7e4)-; HASH(0xcefc6fc)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN CCHHHHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC EKPTYQHLAEVLKKAQSKLERAFWQEI CCCCHHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure AFFSIFKQGQIYLNTWPLEAKLGIIFPENRIMKATSFAQKFMPFVAVFAILWQQFYAKN CHHHHHHCCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLMAFSIAILTALFALLIPFQGLYWLGKRANTPLENQSAVWFYDICERLKQLHEPLPFVQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC EKPTYQHLAEVLKKAQSKLERAFWQEI CCCCHHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800