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The map label for this gene is 30995363

Identifier: 30995363

GI number: 30995363

Start: 241428

End: 242015

Strand: Reverse

Name: 30995363

Synonym: HI0220.2

Alternate gene names: NA

Gene position: 242015-241428 (Counterclockwise)

Preceding gene: 16272182

Following gene: 16273674

Centisome position: 13.22

GC content: 35.03

Gene sequence:

>588_bases
ATGCTTAAAAATTTAGACGAAATAACTTCAAGTATTATCGCTGATCCTCAAAATAAAGATTTTACAGAACGTGGAATTTT
CCCTTTATTTTCGGCTCCTAAAACAGCTCGAATTAATATTGTTGGTCAAGCTCCTGGGTTAAAAGCTGAGCAATCTCGTT
TGTATTGGAATGATAAAAGCGGTGATCGTCTGCGAGAATGGTTGGGAGTAGATTACGATTATTTTTATAATTCTGGGATA
TTTGCGGTTCTTCCAATGGATTTCTATTATCCTGGATATGGTAAATCGGGTGATTTACCACCTCGTCAAGGTTTTGCAGA
AAGATGGCATCCAATGATTTTAGGGAATCTACCTAATATTCAGCTCACTATTCTTATTGGGCAATATGCACAGAAATATT
ATTTACCCGAAAATAAAGATAATGTAACTAACACTGTTAAAAATTATCGTCAATTCTTACCGCACTTTATGCCTCTCGTG
CACCCTTCCCCACGTAATCAGCTTTGGGTAACAAAGAATCCTTGGTTTGAAGAGCAAGTTATTCCTGAATTACAAATTTT
AGTCAAACAGATAATTAATAAAGATTAA

Upstream 100 bases:

>100_bases
AATATAGTTTTAATAAATATACCTATTTACATCATTTAGAGTTTTGATTTTTCATATTTTTCAAATAGACTTTATATATT
CATTTCTAATCTCCTTCATT

Downstream 100 bases:

>100_bases
GTTTTTCATTTCTTACGCATACATAGTAATAACAATCTCGTTTACTTTATGGATATAATAAAGCCTATATGCACAGGTTT
TTTTTATAACGATAATAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGI
FAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHFMPLV
HPSPRNQLWVTKNPWFEEQVIPELQILVKQIINKD

Sequences:

>Translated_195_residues
MLKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGI
FAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHFMPLV
HPSPRNQLWVTKNPWFEEQVIPELQILVKQIINKD
>Mature_195_residues
MLKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGI
FAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHFMPLV
HPSPRNQLWVTKNPWFEEQVIPELQILVKQIINKD

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y220B_HAEIN (O86222)

Other databases:

- EMBL:   L42023
- RefSeq:   NP_438390.2
- ProteinModelPortal:   O86222
- GeneID:   951123
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0220.2
- NMPDR:   fig|71421.1.peg.208
- TIGR:   HI_0220.2
- HOGENOM:   HBG655560
- OMA:   PPRRECA
- ProtClustDB:   CLSK918301
- BioCyc:   HINF71421:HI_0220.2-MONOMER
- InterPro:   IPR005122
- Gene3D:   G3DSA:3.40.470.10

Pfam domain/function: PF03167 UDG; SSF52141 UDNA_glycsylseSF

EC number: NA

Molecular weight: Translated: 22707; Mature: 22707

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKS
CCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCC
GDRLREWLGVDYDYFYNSGIFAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNI
HHHHHHHHCCCHHHEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCE
QLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV
EEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
IPELQILVKQIINKD
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKNLDEITSSIIADPQNKDFTERGIFPLFSAPKTARINIVGQAPGLKAEQSRLYWNDKS
CCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCC
GDRLREWLGVDYDYFYNSGIFAVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNI
HHHHHHHHCCCHHHEECCCEEEEEEHHHCCCCCCCCCCCCCCCCHHHHCCCEEECCCCCE
QLTILIGQYAQKYYLPENKDNVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQV
EEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH
IPELQILVKQIINKD
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800