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The map label for this gene is ybgI [C]

Identifier: 30995356

GI number: 30995356

Start: 112465

End: 113220

Strand: Direct

Name: ybgI [C]

Synonym: HI0105

Alternate gene names: 30995356

Gene position: 112465-113220 (Clockwise)

Preceding gene: 16272073

Following gene: 16272081

Centisome position: 6.15

GC content: 38.76

Gene sequence:

>756_bases
ATGAATAATCTTGAACTTGAACAACTCATTAATCAAAAACTTTCTTCTGATAAAATCAATGACTATGCGCCCAACGGCTT
ACAAGTCGAAGGTAAAACAGAAATCAAAAAAATCATTACTGGCGTAACGGCGAGTCAGGCTTTAATCAATTACGCAATCA
GCCAAAATGCCGATGCTATTTTAGTTCATCATGGCTATTTTTGGAAAAGTGAAACCCCTTGTATCCGAGGAATGAAAGGC
AAGCGAATTAAAGCCCTTTTAGTGAACGACATTAATTTATATGGCTATCATTTGCCATTAGATGTGCACCCAGAATTAGG
TAACAATGCACAATTAGCCAAACTGCTCGATATTGAAAATTTACAACCATTAGAAAAAGGCTCTGTGAGTATTCCTGTTT
GGGGCGAATTAAAAGAACCGATGACAGGTAAAGACTTTGCAGAAAAAATAGAAAAAGTGTTAAATCGAAAACCGTTAATT
TGCATTGAAAACGGACCGCACTTAATCCGAAAAATTGGCATCTGTACCGGTGGCGGACAAGGTTATATTGATCTTGCTGC
AGAACAAGGCTGCGACGCATTTATTACAGGGGAAGTGTCAGAACAAACGATTCATTCTGCCCGTGAGCAAGGATTGTATT
TCTTCTCTGCAGGTCATCACGCAACAGAACGCTATGGCATCAAGGCATTAGGCGAATGGTTGGCGAAAGAATATGGCTTT
GACGTAGAATTTAAAGATATAGATAATCCAGCATAA

Upstream 100 bases:

>100_bases
TAATGAAACTTGGCTAGTGCATTCCCCCACTCCTTTCGCACTAGCCATTTTTTTGGGAATTTTGTACCATATCCCAACTT
TTTCCAATCAACGATCCATT

Downstream 100 bases:

>100_bases
AATACAAAAGTGCGGTAAAAATATTTCTTTTTTAACCGCACTTTTATCTTCTGAAATTATCGTTTAAACATTCCGCCTAA
ACCGCCAAGACCGCCTAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNNLELEQLINQKLSSDKINDYAPNGLQVEGKTEIKKIITGVTASQALINYAISQNADAILVHHGYFWKSETPCIRGMKG
KRIKALLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIENLQPLEKGSVSIPVWGELKEPMTGKDFAEKIEKVLNRKPLI
CIENGPHLIRKIGICTGGGQGYIDLAAEQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERYGIKALGEWLAKEYGF
DVEFKDIDNPA

Sequences:

>Translated_251_residues
MNNLELEQLINQKLSSDKINDYAPNGLQVEGKTEIKKIITGVTASQALINYAISQNADAILVHHGYFWKSETPCIRGMKG
KRIKALLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIENLQPLEKGSVSIPVWGELKEPMTGKDFAEKIEKVLNRKPLI
CIENGPHLIRKIGICTGGGQGYIDLAAEQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERYGIKALGEWLAKEYGF
DVEFKDIDNPA
>Mature_251_residues
MNNLELEQLINQKLSSDKINDYAPNGLQVEGKTEIKKIITGVTASQALINYAISQNADAILVHHGYFWKSETPCIRGMKG
KRIKALLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIENLQPLEKGSVSIPVWGELKEPMTGKDFAEKIEKVLNRKPLI
CIENGPHLIRKIGICTGGGQGYIDLAAEQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERYGIKALGEWLAKEYGF
DVEFKDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=63.7450199203187, Blast_Score=327, Evalue=3e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y105_HAEIN (Q57354)

Other databases:

- EMBL:   L42023
- PIR:   G64142
- RefSeq:   NP_438279.2
- ProteinModelPortal:   Q57354
- SMR:   Q57354
- GeneID:   951007
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0105
- TIGR:   HI_0105
- HOGENOM:   HBG554751
- OMA:   PLDVHPE
- ProtClustDB:   CLSK870002
- BioCyc:   HINF71421:HI_0105-MONOMER
- InterPro:   IPR002678
- PANTHER:   PTHR13799
- TIGRFAMs:   TIGR00486

Pfam domain/function: PF01784 NIF3; SSF102705 interacting_NIF3

EC number: NA

Molecular weight: Translated: 27814; Mature: 27814

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLELEQLINQKLSSDKINDYAPNGLQVEGKTEIKKIITGVTASQALINYAISQNADAI
CCCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
LVHHGYFWKSETPCIRGMKGKRIKALLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIEN
EEECCEEECCCCCHHCCCCCCEEEEEEEECCEEEEEEECEEECCCCCCCCHHHEECCCCC
LQPLEKGSVSIPVWGELKEPMTGKDFAEKIEKVLNRKPLICIENGPHLIRKIGICTGGGQ
CCCHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEHEEEEEECCCC
GYIDLAAEQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERYGIKALGEWLAKEYGF
CEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
DVEFKDIDNPA
CEEECCCCCCC
>Mature Secondary Structure
MNNLELEQLINQKLSSDKINDYAPNGLQVEGKTEIKKIITGVTASQALINYAISQNADAI
CCCCCHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHCCCCCEE
LVHHGYFWKSETPCIRGMKGKRIKALLVNDINLYGYHLPLDVHPELGNNAQLAKLLDIEN
EEECCEEECCCCCHHCCCCCCEEEEEEEECCEEEEEEECEEECCCCCCCCHHHEECCCCC
LQPLEKGSVSIPVWGELKEPMTGKDFAEKIEKVLNRKPLICIENGPHLIRKIGICTGGGQ
CCCHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEHEEEEEECCCC
GYIDLAAEQGCDAFITGEVSEQTIHSAREQGLYFFSAGHHATERYGIKALGEWLAKEYGF
CEEEEECCCCCCEEEECCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
DVEFKDIDNPA
CEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023