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The map label for this gene is yfjD [C]

Identifier: 16272081

GI number: 16272081

Start: 114997

End: 116208

Strand: Direct

Name: yfjD [C]

Synonym: HI0107

Alternate gene names: 16272081

Gene position: 114997-116208 (Clockwise)

Preceding gene: 30995356

Following gene: 16272082

Centisome position: 6.28

GC content: 39.11

Gene sequence:

>1212_bases
GTGTTATCAGCCTATTTTTCTGGTTCTGAAACTGGATTACTCTCCCTCAATAAATATCGTCTTCGTTTTCTATCTGAACA
AGGCAATAAAGGCGCGAAAAAAGCGGAAAAACTGCTAGAAAAGCCAGATACCTTGTTAAGTTTTATTCTTATTTTTAATA
ACCTTGTGAATATCAGCGCATCTGCAATTGCAACAGTAATTGGTATGCGTTTATATGGCGATGCCGGCGTGGCGATTGCA
ACGGGTTTGCTCACTTTCGTAATGCTCGTATTTTCTGAAATATTCCCCAAAACTGTGGCTGCAATGCACGCAGAAAAAGT
GAGTTTTTTTTCAAGTCATATTTTAACTTCATTGCTTAAAATCTTTTATCCGCTCGTTTGGTTAATGAATATTTTTACTA
AATCCTTGATGCAAATAGTAGGGTTAAAACTTGATATGCAAAAACAAGTAATTAGTAGTGAAGAACTGCGTAGTATTGTA
TCAGAAGCGGGCGAAGCAACACCAAATGAACAACATCCACAAATGTTGCTGTCTATTTTGGATATGGAAACCGTCACCGT
TGATGACATTATGGTTCCCCGCAACGAAATCGGCGGTATAAATATTGATGATGATTGGCGAGCCATTATGCGCCAGCTCA
ATCATGCTGCACATAACCGCGTGGTGCTTTACAAAGGCAGCCTTGATGAACAAGTGCTTGGCATTTTGCGCGTGCGTGAA
GCATTCCGCTTGCTCCTTGAAAAAAATGAATTTACCAAAGAAACCTTAATTCGTGCCGCAGATGAAGTGTATTTCATTCC
TGAAAGCACGCCATTAAAAACGCAACTTGCAAATTTCCGTACAAATAAAGAGCGAATTGGCTTAGTTGTAGATGAATACG
GCGATATTAAAGGGCTTGTGACGTTGGAAGATATTTTGGAAGAAATTGTTGGGGATTTTACCACTTCCACCGCCCCAAGC
ATTGACAAAGAAGTAATTCAACAGTCTGATGGTTCAATGATTATCGATGGCTCCGCTAATCTACGCGATCTCAACAAAAT
GTTTAACTGGGAATTAGATACAGAAGATGCTCGTACTTTTAATGGTTTAATCTTAGAACACTTAGAGGAAATACCCGATG
AAGGCACGATTTGCGAAATTGATGGTTTGCTAATCACTATTCTTGAAGTGGGCGATAATATGATAAAACAGGCGAAAGTC
GTCAAACTTTAA

Upstream 100 bases:

>100_bases
TGAAAAATGACCGCACTTTTTGTTGATTAACGAACAAAAGGATTTTCCCTTGGATAGCATTCCCCTTAGTACTTTATTTA
TTATTCTTATTATCTGTTTA

Downstream 100 bases:

>100_bases
TCATAAAAAACTCCACCAAATTGAACCGCACTTTTGACTTGGATCATAAGTGCGGTTCTTTTTTTGCGCATTTTTTAGAA
AAGATTTTTATAATTCTTTC

Product: Mg2+/Co2+ transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISASAIATVIGMRLYGDAGVAIA
TGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIV
SEAGEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKGSLDEQVLGILRVRE
AFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPS
IDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKV
VKL

Sequences:

>Translated_403_residues
MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISASAIATVIGMRLYGDAGVAIA
TGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIV
SEAGEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKGSLDEQVLGILRVRE
AFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPS
IDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKV
VKL
>Mature_403_residues
MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISASAIATVIGMRLYGDAGVAIA
TGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIV
SEAGEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKGSLDEQVLGILRVRE
AFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPS
IDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKV
VKL

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=395, Percent_Identity=25.8227848101266, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI94681046, Length=331, Percent_Identity=25.3776435045317, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI145693175, Length=398, Percent_Identity=61.0552763819096, Blast_Score=504, Evalue=1e-144,
Organism=Escherichia coli, GI1790664, Length=428, Percent_Identity=20.0934579439252, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI87082033, Length=274, Percent_Identity=27.3722627737226, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI1786879, Length=249, Percent_Identity=26.1044176706827, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788119, Length=242, Percent_Identity=28.9256198347107, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 45105; Mature: 45105

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISA
CCCCEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SAIATVIGMRLYGDAGVAIATGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIVSEAGEATPNEQHPQMLLSIL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKGSLDEQVLGILRVRE
HHHHEEHHHEECCCHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH
AFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKERIGLVVDEYGDIKGLV
HHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHCEEEECCCCCCCEE
TLEDILEEIVGDFTTSTAPSIDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTF
EHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHH
NGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKVVKL
HHHHHHHHHHCCCCCCEEEECHHHHHHHHHCHHHHHHHHHCCC
>Mature Secondary Structure
MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISA
CCCCEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
SAIATVIGMRLYGDAGVAIATGLLTFVMLVFSEIFPKTVAAMHAEKVSFFSSHILTSLLK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIVSEAGEATPNEQHPQMLLSIL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLYKGSLDEQVLGILRVRE
HHHHEEHHHEECCCHHCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHH
AFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKERIGLVVDEYGDIKGLV
HHHHHHHCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHCEEEECCCCCCCEE
TLEDILEEIVGDFTTSTAPSIDKEVIQQSDGSMIIDGSANLRDLNKMFNWELDTEDARTF
EHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHH
NGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAKVVKL
HHHHHHHHHHCCCCCCEEEECHHHHHHHHHCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]