| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is ycbK [C]
Identifier: 16273552
GI number: 16273552
Start: 1733968
End: 1734090
Strand: Reverse
Name: ycbK [C]
Synonym: HI1665
Alternate gene names: 16273552
Gene position: 1734090-1733968 (Counterclockwise)
Preceding gene: 16273553
Following gene: 30995468
Centisome position: 94.75
GC content: 43.9
Gene sequence:
>123_bases GTGCCTTTGATTAAAGTGAAATCTTCTGCGGAAAGTCTGCGAAATGGTGGCGTGGGTTATTATCCAACCAGTAATTTCAT TCACGTAGATACAGGCCCTGTGAGAACTTGGAAAGGCGTGTAA
Upstream 100 bases:
>100_bases GTTCAGCCTCTACTAATGCAATGCGTCGTCGCCAAAGTCGTGCGTAGCGAAAAATAGTTATCACATTAAAGGAAAAGCCA TTGATTTTCGTATTGCGGGT
Downstream 100 bases:
>100_bases AACAAATGTAAAATTAACCGCACTTTTGTGCGGTTTTTCATTGGAAAAGAAATGTTATTTGACAGCCATCTTCATTTAGA CCAACTCTCTGACGAGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 40; Mature: 39
Protein sequence:
>40_residues MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV
Sequences:
>Translated_40_residues MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV >Mature_39_residues PLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV
Specific function: Unknown
COG id: COG3108
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1665_HAEIN (P44283)
Other databases:
- EMBL: L42023 - PIR: E64039 - RefSeq: NP_439807.1 - ProteinModelPortal: P44283 - GeneID: 950493 - GenomeReviews: L42023_GR - KEGG: hin:HI1665 - TIGR: HI_1665 - BioCyc: HINF71421:HI_1665-MONOMER - InterPro: IPR010275 - InterPro: IPR009045 - Gene3D: G3DSA:3.30.1380.10
Pfam domain/function: PF05951 Peptidase_M15_2
EC number: NA
Molecular weight: Translated: 4363; Mature: 4232
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV CCEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCC >Mature Secondary Structure PLIKVKSSAESLRNGGVGYYPTSNFIHVDTGPVRTWKGV CEEECCCCCHHHHCCCCCCCCCCCEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800