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The map label for this gene is yraM [C]

Identifier: 16273542

GI number: 16273542

Start: 1720937

End: 1722664

Strand: Direct

Name: yraM [C]

Synonym: HI1655

Alternate gene names: 16273542

Gene position: 1720937-1722664 (Clockwise)

Preceding gene: 30995465

Following gene: 16273543

Centisome position: 94.03

GC content: 39.06

Gene sequence:

>1728_bases
ATGTCTATTCTATTACAAGGCGAACGTTTTAAAAAACGTTTAATGCCAATTTTATTGTCAATGGCTTTAGCTGGCTGTTC
AAATCTACTTGGTAGCAATTTCACGCAAACCTTACAAAAAGATGCAAATGCAAGTTCTGAATTTTATATAAACAAATTAG
GGCAAACACAAGAACTTGAAGATCAACAAACCTATAAATTGCTCGCGGCTCGAGTGTTAATCCGTGAAAATAAGGTTGAA
CAATCGGCAGCGTTATTGAGGGAATTAGGCGAATTAAATGATGCGCAAAAATTAGATCGTGCATTAATTGAAGCGAGAAT
TTCTGCTGCAAAAAATGCCAATGAAGTCGCACAAAATCAATTACGTGCATTGGATTTAAATAAACTAAGCCCGTCACAAA
AATCTCGTTATTACGAAACCTTAGCTATTGTTGCCGAAAACCGTAAAGACATGATTGAAGCGGTAAAAGCGCGGATAGAA
ATGGATAAGAATTTAACAGATGTACAACGTCATCAAGATAATATTGATAAAACTTGGGCTTTATTGCGTTCAGCGAATAC
TGGCGTTATTAATAATGCCTCTGATGAAGGTAATGCAGCTTTAGGCGGTTGGCTAACATTAATCAAAGCCTACAACGATT
ATATTCGTCAGCCTGTACAATTAAGCCAAGCCTTACAAAGTTGGAAAAATGCTTATCCAAATCATGCAGCCGCAACGTTG
TTCCCAAAAGAATTGCTTACATTGCTTAATTTCCAACAAACGAATGTGTCACAAATTGGTTTACTCTTGCCATTAAGTGG
TGACGGACAAATTCTTGGCACAACCATTCAATCGGGTTTTAACGACGCGAAAGGTAACTCAACCATTCCAGTGCAAGTGT
TTGATACCTCAATGAATTCTGTCCAAGATATCATTGCGCAAGCAAAACAAGCGGGGATTAAAACCTTAGTTGGCCCATTA
CTAAAACAAAATCTTGATGTGATTTTAGCAGATCCTGCTCAAATTCAAGGTATGGATGTGCTTGCATTAAATGCCACACC
AAATTCTCGTGCGATTCCTCAACTTTGTTATTACGGACTTTCGCCAGAAGATGAAGCTGAATCTGCCGCCAATAAAATGT
GGAACGATGGCGTGCGTAATCCACTTGTCGCAATGCCGCAAAATGATTTAGGACAACGCGTAGGCAATGCCTTTAATGTA
CGTTGGCAACAATTAGCAGGTACTGATGCGAATATCCGTTACTACAATTTGCCTGCGGATGTGACCTATTTCGTTCAAGA
AAATAACTCAAATACAACCGCACTTTATGCCGTAGCAAGTCCAACTGAACTGGCAGAAATGAAAGGTTATTTAACAAATA
TCGTACCTAATTTAGCGATTTATGCCAGTTCTCGAGCAAGCGCAAGTGCGACAAACACTAATACCGACTTCATCGCACAG
ATGAACGGTGTACAGTTTAGTGATATTCCATTTTTTAAAGATACCAATTCTCCACAATATCAGAAGTTAGCAAAATCCAC
GGGGGGCGAATATCAATTGATGCGTTTATATGCAATGGGTGCGGATGCGTGGTTGCTCATTAATCAATTTAATGAATTAC
GCCAAGTGCCAGGCTATCGCTTGAGTGGCTTAACAGGGATTTTAAGTGCTGATACCAACTGTAATGTTGAACGCGATATG
ACTTGGTATCAATATCAAGATGGTGCAATTGTACCAGTTGCAAACTAA

Upstream 100 bases:

>100_bases
ATGTATAAAATTCCGGTTAAATCAGTCATTTTTGTTTGCTTTTAAGTTATGAGATAAGTAAGATCTGCTACGACTATTGT
CTGTTTATGATGGAGCAAAG

Downstream 100 bases:

>100_bases
TGTTTTCTTTAAAACGTCAGCAAGGGGCGAGCTTTGAGCATCAAGCTCGTCTTTTTTTAGAATCAAAAGGCTTAATATTT
ATTGCGGCTAATCAAAATTT

Product: antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MSILLQGERFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVE
QSAALLRELGELNDAQKLDRALIEARISAAKNANEVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIE
MDKNLTDVQRHQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQAGIKTLVGPL
LKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNV
RWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQ
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDM
TWYQYQDGAIVPVAN

Sequences:

>Translated_575_residues
MSILLQGERFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVE
QSAALLRELGELNDAQKLDRALIEARISAAKNANEVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIE
MDKNLTDVQRHQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQAGIKTLVGPL
LKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNV
RWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQ
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDM
TWYQYQDGAIVPVAN
>Mature_574_residues
SILLQGERFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVEQ
SAALLRELGELNDAQKLDRALIEARISAAKNANEVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEM
DKNLTDVQRHQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATLF
PKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQAGIKTLVGPLL
KQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVR
WQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQM
NGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDMT
WYQYQDGAIVPVAN

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM

Homologues:

Organism=Escherichia coli, GI1789537, Length=336, Percent_Identity=34.2261904761905, Blast_Score=186, Evalue=4e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1655_HAEIN (P45299)

Other databases:

- EMBL:   L42023
- PIR:   B64174
- RefSeq:   NP_439797.1
- PDB:   3CKM
- PDBsum:   3CKM
- ProteinModelPortal:   P45299
- SMR:   P45299
- GeneID:   950219
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1655
- NMPDR:   fig|71421.1.peg.1569
- TIGR:   HI_1655
- HOGENOM:   HBG417064
- OMA:   DVNFSVF
- ProtClustDB:   CLSK870185
- BioCyc:   HINF71421:HI_1655-MONOMER
- InterPro:   IPR007443

Pfam domain/function: PF04348 LppC

EC number: NA

Molecular weight: Translated: 63438; Mature: 63306

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILLQGERFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELE
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCCH
DQQTYKLLAARVLIRENKVEQSAALLRELGELNDAQKLDRALIEARISAAKNANEVAQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEMDKNLTDVQRHQDNIDKTWA
HHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
LLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
HHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHH
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNS
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEEECCCHHH
VQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCC
SPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPAD
CCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCHHCCCHHHHCCCCCCEEEEECCCC
VTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQ
EEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHEEE
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYR
ECCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE
LSGLTGILSADTNCNVERDMTWYQYQDGAIVPVAN
ECCCEEEEECCCCCCCCCCCCEEEECCCEEEECCC
>Mature Secondary Structure 
SILLQGERFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELE
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCCH
DQQTYKLLAARVLIRENKVEQSAALLRELGELNDAQKLDRALIEARISAAKNANEVAQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
LRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEMDKNLTDVQRHQDNIDKTWA
HHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
LLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
HHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHH
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNS
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEEECCCHHH
VQDIIAQAKQAGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCC
SPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPAD
CCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCHHCCCHHHHCCCCCCEEEEECCCC
VTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLAIYASSRASASATNTNTDFIAQ
EEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHEEE
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYR
ECCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE
LSGLTGILSADTNCNVERDMTWYQYQDGAIVPVAN
ECCCEEEEECCCCCCCCCCCCEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800