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The map label for this gene is yraN [C]

Identifier: 16273543

GI number: 16273543

Start: 1722664

End: 1723023

Strand: Direct

Name: yraN [C]

Synonym: HI1656

Alternate gene names: 16273543

Gene position: 1722664-1723023 (Clockwise)

Preceding gene: 16273542

Following gene: 16273544

Centisome position: 94.13

GC content: 35.83

Gene sequence:

>360_bases
ATGTTTTCTTTAAAACGTCAGCAAGGGGCGAGCTTTGAGCATCAAGCTCGTCTTTTTTTAGAATCAAAAGGCTTAATATT
TATTGCGGCTAATCAAAATTTCAAATGTGGTGAACTTGATCTAATAATGAATGACAAAGAAACTATCGTCTTTGTTGAAG
TTCGCCAACGAAGTCATTCCGCCTATGGTTCTGCTATAGAAAGCGTAGATTGGCGAAAACAACAAAAATGGTTAGATGCC
GCAAATTTATGGCTTGCAAAACAAAATATGAGCTTAGAAGATGCTAATTGCCGCTTTGATTTAATCGCTTTTGGCAAAAC
ACCTCAAGATATTCAATGGATTCCTAATTTTCTCGATTAA

Upstream 100 bases:

>100_bases
GCTTAACAGGGATTTTAAGTGCTGATACCAACTGTAATGTTGAACGCGATATGACTTGGTATCAATATCAAGATGGTGCA
ATTGTACCAGTTGCAAACTA

Downstream 100 bases:

>100_bases
TGGCTTTTTATAATGTTACAAAAAGTAAAAGATATTTATAGCGAAAGTATTCAAATTCAAATTGCAGCATCAAGTATGCT
TTCTGAAAATATTACCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD

Sequences:

>Translated_119_residues
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
>Mature_119_residues
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=111, Percent_Identity=49.5495495495495, Blast_Score=109, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1656_HAEIN (P45300)

Other databases:

- EMBL:   L42023
- PIR:   C64174
- RefSeq:   NP_439798.1
- GeneID:   950807
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1656
- NMPDR:   fig|71421.1.peg.1570
- TIGR:   HI_1656
- HOGENOM:   HBG710155
- OMA:   EVRQRKN
- ProtClustDB:   PRK12497
- BioCyc:   HINF71421:HI_1656-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13812; Mature: 13812

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHS
CCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCC
AYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCC
>Mature Secondary Structure
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHS
CCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCC
AYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800