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The map label for this gene is spr

Identifier: 16273540

GI number: 16273540

Start: 1717801

End: 1718352

Strand: Reverse

Name: spr

Synonym: HI1652

Alternate gene names: 16273540

Gene position: 1718352-1717801 (Counterclockwise)

Preceding gene: 16273541

Following gene: 16273539

Centisome position: 93.89

GC content: 35.87

Gene sequence:

>552_bases
ATGTTGAAAAGAATTTTAGTTATTATTGGTTTAGCTGTATTAGCAACCGCTTGTTCTAATGCACCACGAACGGTAAGTCA
TCAGGTTATTTCAGAAAATGATGATATTCAATTAACTGGTTTAATTAATAATTTAGAAAAAGATAATCGAACAGGCATTT
TTCACAAAGTGAGAACAAACCGTTCCTCTGCTTTGATGGGCGATAAGGCTCTAGCCAGTGTTTATAATGAATGGGTTGGC
ACTCGCTATCGTATGGGCGGTACCACTAAACGTGGTATTGATTGTTCAGCATTTATGCAAACTACTTTTTCTGAAGTTTT
TGGTATTGAATTGCCTCGTTCTACGGCTGAACAGCGTCATTTAGGTAGAAAAATTAATAAATCAGAACTTAAAAAAGGCG
ATTTAGTTTTCTTCCGTAAAAATAATCACGTTGGTGTTTATATTGGTAATAACCAATTTATGCACGCAAGTACAGGGCAA
GGCGTGACAATAAGTTCCCTTGATGAAAAATATTGGGCTAGAACCTACACTCAATCGCGTCGTATTATGTAA

Upstream 100 bases:

>100_bases
AAGATCACAAAAATTCCATTAGAATTGGATTTTTACTGGCAATTTTATTCAAATTTTGATAGCCGCTGCGAAATTTTATT
TCTTTTAATTATTTGAAATT

Downstream 100 bases:

>100_bases
TGAAAAAGAAAAGCGAACATTAAGTTCGGTTTTTTTGATCAGTTTATTGATAAATGATCTGACCTCAAAAAGTTAGACTT
ATTTAGCTCAAGGACTGAGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLKRILVIIGLAVLATACSNAPRTVSHQVISENDDIQLTGLINNLEKDNRTGIFHKVRTNRSSALMGDKALASVYNEWVG
TRYRMGGTTKRGIDCSAFMQTTFSEVFGIELPRSTAEQRHLGRKINKSELKKGDLVFFRKNNHVGVYIGNNQFMHASTGQ
GVTISSLDEKYWARTYTQSRRIM

Sequences:

>Translated_183_residues
MLKRILVIIGLAVLATACSNAPRTVSHQVISENDDIQLTGLINNLEKDNRTGIFHKVRTNRSSALMGDKALASVYNEWVG
TRYRMGGTTKRGIDCSAFMQTTFSEVFGIELPRSTAEQRHLGRKINKSELKKGDLVFFRKNNHVGVYIGNNQFMHASTGQ
GVTISSLDEKYWARTYTQSRRIM
>Mature_183_residues
MLKRILVIIGLAVLATACSNAPRTVSHQVISENDDIQLTGLINNLEKDNRTGIFHKVRTNRSSALMGDKALASVYNEWVG
TRYRMGGTTKRGIDCSAFMQTTFSEVFGIELPRSTAEQRHLGRKINKSELKKGDLVFFRKNNHVGVYIGNNQFMHASTGQ
GVTISSLDEKYWARTYTQSRRIM

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family

Homologues:

Organism=Escherichia coli, GI1788501, Length=193, Percent_Identity=41.4507772020725, Blast_Score=151, Evalue=2e-38,
Organism=Escherichia coli, GI1788001, Length=110, Percent_Identity=50.9090909090909, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1787944, Length=138, Percent_Identity=38.4057971014493, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786421, Length=114, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NLPC_HAEIN (P45296)

Other databases:

- EMBL:   L42023
- PIR:   H64173
- RefSeq:   NP_439794.1
- ProteinModelPortal:   P45296
- SMR:   P45296
- MEROPS:   C40.004
- GeneID:   950494
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1652
- TIGR:   HI_1652
- HOGENOM:   HBG362075
- OMA:   LPERNIS
- ProtClustDB:   CLSK892421
- BioCyc:   HINF71421:HI_1652-MONOMER
- InterPro:   IPR000064

Pfam domain/function: PF00877 NLPC_P60

EC number: NA

Molecular weight: Translated: 20586; Mature: 20586

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRILVIIGLAVLATACSNAPRTVSHQVISENDDIQLTGLINNLEKDNRTGIFHKVRTN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEECC
RSSALMGDKALASVYNEWVGTRYRMGGTTKRGIDCSAFMQTTFSEVFGIELPRSTAEQRH
CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LGRKINKSELKKGDLVFFRKNNHVGVYIGNNQFMHASTGQGVTISSLDEKYWARTYTQSR
HHCCCCHHHCCCCCEEEEEECCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHHCC
RIM
CCC
>Mature Secondary Structure
MLKRILVIIGLAVLATACSNAPRTVSHQVISENDDIQLTGLINNLEKDNRTGIFHKVRTN
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHCCCCCCCCEEEEEECC
RSSALMGDKALASVYNEWVGTRYRMGGTTKRGIDCSAFMQTTFSEVFGIELPRSTAEQRH
CCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
LGRKINKSELKKGDLVFFRKNNHVGVYIGNNQFMHASTGQGVTISSLDEKYWARTYTQSR
HHCCCCHHHCCCCCEEEEEECCEEEEEECCCEEEEECCCCCEEEHHHHHHHHHHHHHHCC
RIM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800