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The map label for this gene is yoaB [C]

Identifier: 16273516

GI number: 16273516

Start: 1691109

End: 1691459

Strand: Direct

Name: yoaB [C]

Synonym: HI1627

Alternate gene names: 16273516

Gene position: 1691109-1691459 (Clockwise)

Preceding gene: 16273513

Following gene: 16273517

Centisome position: 92.4

GC content: 36.75

Gene sequence:

>351_bases
ATGACAATTCAACGCATTTTACCCAGTGCACGTTTAAGTGAAGTTTCAATTCATAACAACCTCGCCTATTTTGCAGGGCA
AGTTCCAGAATTAACCATCGAGCAAAATGCCTACGAACAAACCAAAGAAGTATTAGGTTTAATTGATAAATTGTTAGCAA
AAATTGGCTCCAATAAAAGCAACATTTTAACTGCGCAAATTTTCTTAGCTGATATGAAAGATTATGCACAATTAAATCAA
GCTTGGGATGAATGGGTCGATCATGTTAGCCCACCAAGTCGAGCGACAGTGGAAGCTAAATTAGCGGATCCTCATTGGAA
AGTTGAAATTGTTATTATTGCAACTTGTTAG

Upstream 100 bases:

>100_bases
AATTGAGAATAATTGTCGGGTATTTTAGCCTAGTAAAGAGGATTTTACAAAGCAGTAAAGGCTATTTAGAATAGAAGAAA
ACACCCCAAAGGAGAACCCT

Downstream 100 bases:

>100_bases
TTTTTTAAGCCGAATAAACAGGAGAATATTATGGAAAATTGGACCAATGAAATTTGGGTAGCAATTGGCATCGCTTTTAT
TGTTGGATTATTTATTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKSNILTAQIFLADMKDYAQLNQ
AWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC

Sequences:

>Translated_116_residues
MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKSNILTAQIFLADMKDYAQLNQ
AWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC
>Mature_115_residues
TIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKSNILTAQIFLADMKDYAQLNQA
WDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=53.5087719298246, Blast_Score=112, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1627_HAEIN (P71394)

Other databases:

- EMBL:   L42023
- PIR:   C64173
- RefSeq:   NP_439769.1
- ProteinModelPortal:   P71394
- SMR:   P71394
- GeneID:   950462
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1627
- NMPDR:   fig|71421.1.peg.1541
- TIGR:   HI_1627
- HOGENOM:   HBG695954
- OMA:   FVEIAND
- ProtClustDB:   CLSK789416
- BioCyc:   HINF71421:HI_1627-MONOMER
- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897
- Gene3D:   G3DSA:3.30.1330.40
- PANTHER:   PTHR11803

Pfam domain/function: PF01042 Ribonuc_L-PSP; SSF55298 YjgF/chorismate_mutase-like

EC number: NA

Molecular weight: Translated: 13001; Mature: 12870

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKS
CCHHHHCCCCHHHHHHHHCCHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
NILTAQIFLADMKDYAQLNQAWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEC
>Mature Secondary Structure 
TIQRILPSARLSEVSIHNNLAYFAGQVPELTIEQNAYEQTKEVLGLIDKLLAKIGSNKS
CHHHHCCCCHHHHHHHHCCHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCC
NILTAQIFLADMKDYAQLNQAWDEWVDHVSPPSRATVEAKLADPHWKVEIVIIATC
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800