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The map label for this gene is yfcM [C]

Identifier: 16273463

GI number: 16273463

Start: 1632558

End: 1633094

Strand: Reverse

Name: yfcM [C]

Synonym: HI1563

Alternate gene names: 16273463

Gene position: 1633094-1632558 (Counterclockwise)

Preceding gene: 16273464

Following gene: 16273462

Centisome position: 89.23

GC content: 40.22

Gene sequence:

>537_bases
ATGGAACATAAATTAGAAGATATTATTGCAATTTTTAATCAATGTTTTGAAGAGGAATACAACACTCGCTTAGTCAAAGG
CGGTGATGAGCCTATTTATTTACCCGCAAATGATGAAGTGCCTTATAACGCGATTTATTTTGCACGAGGCTTTTACAGCA
GTGCATTGCATGAAATTGCCCATTGGTTAGTGGCAGGCAAAGAACGCCGTAAACTAGAAGATTTTGGTTATTGGTATGAG
CCAGATGGACGTTCAGAAGAACGCCAGCGTGACTTTGAAAAAGTTGAAGTTAAACCGCAAGCATTAGAGTGGATTTTGGC
GACGGCGGCAGGTTTTCGTTATTTTGCCAGTGCGGATAATTTGAATGGCAATCCAGGCGATACACAGCCTTTTAAACAAG
CCGTGTATGAACAAGTGAAAATCTACGCGGAAAAAGGTTTACCAAAACGAGCTGAAACATTACGCAAGGCGTTAGTGGCA
TTTTATAGCACAGAAGATGACATTAATTTGGCGAAGTTTGATGTCACGTGTATTTAA

Upstream 100 bases:

>100_bases
TTCGTTTGATTGGGTTACATGTCAATTTACCTGAAGAAAATAAACAAGAACAAATGAGCCTATGGTGATATAATCTTGCG
GTTTTTTAGGAGTCGATACC

Downstream 100 bases:

>100_bases
TGGCAGAAAGTGATCAAAATTGCTCACTTTTTTCAGTCTTAAGCCCTCCAATTCCCTCCTAATTAAATAGTTCAATTTTT
AATCATTTCACACCCAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAETLRKALVA
FYSTEDDINLAKFDVTCI

Sequences:

>Translated_178_residues
MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAETLRKALVA
FYSTEDDINLAKFDVTCI
>Mature_178_residues
MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIAHWLVAGKERRKLEDFGYWYE
PDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADNLNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAETLRKALVA
FYSTEDDINLAKFDVTCI

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcM

Homologues:

Organism=Escherichia coli, GI1788666, Length=163, Percent_Identity=55.2147239263804, Blast_Score=190, Evalue=6e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1563_HAEIN (P44255)

Other databases:

- EMBL:   L42023
- PIR:   D64036
- RefSeq:   NP_439712.1
- GeneID:   950423
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1563
- NMPDR:   fig|71421.1.peg.1490
- TIGR:   HI_1563
- HOGENOM:   HBG296630
- OMA:   AAGFRYF
- ProtClustDB:   CLSK870119
- BioCyc:   HINF71421:HI_1563-MONOMER
- InterPro:   IPR007411

Pfam domain/function: PF04315 DUF462

EC number: NA

Molecular weight: Translated: 20604; Mature: 20604

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIA
CCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADN
HHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
LNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAETLRKALVAFYSTEDDINLAKFDVTCI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC
>Mature Secondary Structure
MEHKLEDIIAIFNQCFEEEYNTRLVKGGDEPIYLPANDEVPYNAIYFARGFYSSALHEIA
CCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
HWLVAGKERRKLEDFGYWYEPDGRSEERQRDFEKVEVKPQALEWILATAAGFRYFASADN
HHHHCCHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
LNGNPGDTQPFKQAVYEQVKIYAEKGLPKRAETLRKALVAFYSTEDDINLAKFDVTCI
CCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800