Definition Haemophilus influenzae Rd KW20 chromosome, complete genome.
Accession NC_000907
Length 1,830,138

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The map label for this gene is 16273462

Identifier: 16273462

GI number: 16273462

Start: 1632147

End: 1632305

Strand: Reverse

Name: 16273462

Synonym: HI1562

Alternate gene names: NA

Gene position: 1632305-1632147 (Counterclockwise)

Preceding gene: 16273463

Following gene: 16273461

Centisome position: 89.19

GC content: 35.85

Gene sequence:

>159_bases
GTGTTAAGTAAAGATCCGAAAGTGTTAATTAAGCTAGGCGAGTTGGAAAAAGATAAATCCAAAGCCAAAAAATATTTTGG
CGATGCTTGCGATTTACGCAGTCAAGAAGGGTGTGATAAATATCGTGAGCTCAATCAAAAACAAGACACCAATAAATAG

Upstream 100 bases:

>100_bases
TAGGATTAGCAAGCATATTGTCGCCTTGTTTTAGTGTGTTTTTGATTTGCCAAAACAGCCTGATCTTCAAGAAAAAATTG
AAGCAATTAAAGAAGAATTG

Downstream 100 bases:

>100_bases
TGGGTAAATCACAAATAAAGCGTCTGAGATTCTTAATTTCCTTTTCGCTGTCAATTTTCCCTAAAATCGGCTAGAATACG
CCGATTTTATTTTCGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK

Sequences:

>Translated_52_residues
MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK
>Mature_52_residues
MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1562_HAEIN (P44254)

Other databases:

- EMBL:   L42023
- PIR:   C64036
- RefSeq:   NP_439711.1
- GeneID:   950422
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1562
- NMPDR:   fig|71421.1.peg.1489
- TIGR:   HI_1562
- BioCyc:   HINF71421:HI_1562-MONOMER
- GO:   GO:0005488
- InterPro:   IPR011990
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6035; Mature: 6035

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK
CCCCCCHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK
CCCCCCHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023