| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is 16273462
Identifier: 16273462
GI number: 16273462
Start: 1632147
End: 1632305
Strand: Reverse
Name: 16273462
Synonym: HI1562
Alternate gene names: NA
Gene position: 1632305-1632147 (Counterclockwise)
Preceding gene: 16273463
Following gene: 16273461
Centisome position: 89.19
GC content: 35.85
Gene sequence:
>159_bases GTGTTAAGTAAAGATCCGAAAGTGTTAATTAAGCTAGGCGAGTTGGAAAAAGATAAATCCAAAGCCAAAAAATATTTTGG CGATGCTTGCGATTTACGCAGTCAAGAAGGGTGTGATAAATATCGTGAGCTCAATCAAAAACAAGACACCAATAAATAG
Upstream 100 bases:
>100_bases TAGGATTAGCAAGCATATTGTCGCCTTGTTTTAGTGTGTTTTTGATTTGCCAAAACAGCCTGATCTTCAAGAAAAAATTG AAGCAATTAAAGAAGAATTG
Downstream 100 bases:
>100_bases TGGGTAAATCACAAATAAAGCGTCTGAGATTCTTAATTTCCTTTTCGCTGTCAATTTTCCCTAAAATCGGCTAGAATACG CCGATTTTATTTTCGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK
Sequences:
>Translated_52_residues MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK >Mature_52_residues MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1562_HAEIN (P44254)
Other databases:
- EMBL: L42023 - PIR: C64036 - RefSeq: NP_439711.1 - GeneID: 950422 - GenomeReviews: L42023_GR - KEGG: hin:HI1562 - NMPDR: fig|71421.1.peg.1489 - TIGR: HI_1562 - BioCyc: HINF71421:HI_1562-MONOMER - GO: GO:0005488 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6035; Mature: 6035
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK CCCCCCHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MLSKDPKVLIKLGELEKDKSKAKKYFGDACDLRSQEGCDKYRELNQKQDTNK CCCCCCHHHHHCCCCCCHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023