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The map label for this gene is umuD [C]

Identifier: 16273446

GI number: 16273446

Start: 1617353

End: 1617775

Strand: Direct

Name: umuD [C]

Synonym: HI1546

Alternate gene names: 16273446

Gene position: 1617353-1617775 (Clockwise)

Preceding gene: 16273442

Following gene: 30995457

Centisome position: 88.37

GC content: 32.39

Gene sequence:

>423_bases
ATGAACAACCAAACTTTGGCTACACAATATGAAATGGATTTTTCTTATAATCCACTGCCTTTTTTCAGTGATATAGAAGA
TAACCTTAAATTCAACAAAAAATTAGATTTAAATCTTTACTGTATCAAACGTCCAAAACAAACTTGTTTTATTCATATAA
CTAACCCAAATATGTTGGCTTGGGGAATTGAAAGCGGCGATATGTTAGTCGTCGAAAAAAATGACGATCTTTATTCTGGT
GATCTTGTTGTGCTAGAAGAAAATAATGAATTTCATGTCTATGAATTTATGGCGCATAGCGGCAATTATCTTTTCATGGC
ATTGGATTCCACAACACAAAATATAAATACAAAAAGATTGGTCAAATTTACCTATTATCGGCACCGTGACCAATACGATT
CATCAAATGAAACGTCGCGATAA

Upstream 100 bases:

>100_bases
AACCTATTGACACCCTGTATGAAATATCAGTAAAATTTAACTGTACAAAAAAACAAGGTAAAAGGTTATTTATCCATATT
ATTTAACAGGAGATAAGAGA

Downstream 100 bases:

>100_bases
AATGAAATGGGCAGCGTAGTTAAAAGCAAATAAAAAAGTGCGGTGAAAATCAACCGCACTTCTATCTAGTATCTAGATTA
TATTTCAATTAATTACTCGT

Product: ImpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHSGNYLFMALDSTTQNINTKRLVKFTYYRHRDQYDSSNETSR

Sequences:

>Translated_140_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHSGNYLFMALDSTTQNINTKRLVKFTYYRHRDQYDSSNETSR
>Mature_140_residues
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLAWGIESGDMLVVEKNDDLYSG
DLVVLEENNEFHVYEFMAHSGNYLFMALDSTTQNINTKRLVKFTYYRHRDQYDSSNETSR

Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]

COG id: COG1974

COG function: function code KT; SOS-response transcriptional repressors (RecA-mediated autopeptidases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S24 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1546_HAEIN (P44249)

Other databases:

- EMBL:   L42023
- PIR:   G64035
- RefSeq:   NP_439695.1
- ProteinModelPortal:   P44249
- SMR:   P44249
- GeneID:   950409
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1546
- NMPDR:   fig|71421.1.peg.1473
- TIGR:   HI_1546
- HOGENOM:   HBG297245
- ProtClustDB:   CLSK808538
- BioCyc:   HINF71421:HI_1546-MONOMER
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056
- Gene3D:   G3DSA:2.10.109.10

Pfam domain/function: PF00717 Peptidase_S24; SSF51306 Pept_S24_S26_C

EC number: 3.4.21.- [C]

Molecular weight: Translated: 16579; Mature: 16579

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLA
CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECEEECEEEEEEECCCCEEEEEECCCCEEE
WGIESGDMLVVEKNDDLYSGDLVVLEENNEFHVYEFMAHSGNYLFMALDSTTQNINTKRL
EEECCCCEEEEECCCCEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEE
VKFTYYRHRDQYDSSNETSR
EEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNNQTLATQYEMDFSYNPLPFFSDIEDNLKFNKKLDLNLYCIKRPKQTCFIHITNPNMLA
CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECEEECEEEEEEECCCCEEEEEECCCCEEE
WGIESGDMLVVEKNDDLYSGDLVVLEENNEFHVYEFMAHSGNYLFMALDSTTQNINTKRL
EEECCCCEEEEECCCCEECCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCEEE
VKFTYYRHRDQYDSSNETSR
EEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800