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The map label for this gene is ydjA [C]

Identifier: 16273442

GI number: 16273442

Start: 1613939

End: 1614493

Strand: Direct

Name: ydjA [C]

Synonym: HI1542

Alternate gene names: 16273442

Gene position: 1613939-1614493 (Clockwise)

Preceding gene: 16273440

Following gene: 16273446

Centisome position: 88.19

GC content: 41.08

Gene sequence:

>555_bases
ATGGATGCACTTACACTTTTAACCACAAGAAAATCAAACAAAAAATTGACCGCACCTGCACCTAATGCAGAACAGCTTGA
GCGTATTTTCGAAGCAGCAATGCGTGCACCAGATCACGGAAAATTACATCCTTATCATTTTATTGTAATGGAAAATGAGA
GCTTAAATAAATTAGAAACGCTACTTAAAGCTGCCGTTGTAGAATTTGATCTTGGGGAAGAAAAATTGATGAAAGCCGAA
AACCTAGCACATCGCGCACCTATGGTTATTGGCGTGGTAGCAAAAATCGATCCAACTATCGCTAAAGTGCCTGGTTGGGA
ACAAATGTTGAGTGCAGGTTGTGCAACTTATGGATTACAACTGGCTGCACAAGCACAAGGATTTGATAATGTGTGGATTT
CAGGGAAATGGGTTAATGGCACTGCATTACGAGAAGCGTTCGGATGTCGTGAACAAGATCGTGTGATTGCGTTAGTCATG
ATTGGCACGGGCATGGAGAAAGCAGAACGTGAATGCCGAGTTATCGATACAAAAGATTTTGTAACCTATCTATAA

Upstream 100 bases:

>100_bases
CATACAAATTACCTTTAAAAAATTTGTGCTAGCGTATCACAAAGCCTTGTCAAAAACTATGCTATAATCCACCGCACTTT
TACTTATAAGGGATAATAAA

Downstream 100 bases:

>100_bases
AATATTGCTTGCTTTCCTCAATACTTAGAGAAAAGCAAAATATTGCTCTACTCTTCTTCCAATTCATCCGCCATTGTCGC
CAATATTTCTCGTGTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDALTLLTTRKSNKKLTAPAPNAEQLERIFEAAMRAPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAE
NLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAGCATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVM
IGTGMEKAERECRVIDTKDFVTYL

Sequences:

>Translated_184_residues
MDALTLLTTRKSNKKLTAPAPNAEQLERIFEAAMRAPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAE
NLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAGCATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVM
IGTGMEKAERECRVIDTKDFVTYL
>Mature_184_residues
MDALTLLTTRKSNKKLTAPAPNAEQLERIFEAAMRAPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAE
NLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAGCATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVM
IGTGMEKAERECRVIDTKDFVTYL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family

Homologues:

Organism=Escherichia coli, GI1788063, Length=184, Percent_Identity=44.5652173913043, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1542_HAEIN (P45244)

Other databases:

- EMBL:   L42023
- PIR:   D64172
- RefSeq:   NP_439691.1
- ProteinModelPortal:   P45244
- SMR:   P45244
- GeneID:   950405
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1542
- NMPDR:   fig|71421.1.peg.1469
- TIGR:   HI_1542
- HOGENOM:   HBG751302
- OMA:   LNRVSVP
- ProtClustDB:   CLSK808537
- BioCyc:   HINF71421:HI_1542-MONOMER
- InterPro:   IPR000415

Pfam domain/function: PF00881 Nitroreductase; SSF55469 Nitroreductase

EC number: NA

Molecular weight: Translated: 20400; Mature: 20400

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: BINDING 35-35 BINDING 39-39

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALTLLTTRKSNKKLTAPAPNAEQLERIFEAAMRAPDHGKLHPYHFIVMENESLNKLET
CCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
LLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAGCATYGLQ
HHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVMIGTGMEKAERECRVIDTKDF
HHECCCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCEEECCHHH
VTYL
HHCC
>Mature Secondary Structure
MDALTLLTTRKSNKKLTAPAPNAEQLERIFEAAMRAPDHGKLHPYHFIVMENESLNKLET
CCCEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH
LLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAGCATYGLQ
HHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHH
LAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVMIGTGMEKAERECRVIDTKDF
HHECCCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCEEECCHHH
VTYL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800