| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273419
Identifier: 16273419
GI number: 16273419
Start: 1588834
End: 1589241
Strand: Direct
Name: 16273419
Synonym: HI1519
Alternate gene names: NA
Gene position: 1588834-1589241 (Clockwise)
Preceding gene: 16273418
Following gene: 16273420
Centisome position: 86.81
GC content: 49.51
Gene sequence:
>408_bases ATGTCAGATTTAGCCCTAACATGGCATAACGGCGAAGGCGACTTGGTGCTAGGCACTGAGTCGCTTTTGCTTGATGATAG CCTTACCAATGCCATTATCATTAGCCTGTTCACTGATTTGCGCGTGGAGGGTGAACGTGGCTGGTGGGGTGATAGCTATA ACGATGGCTTTCAAACCGGCTCAAAACTTTGGACTTTAAGCCGTGCCAAACAACTCCCCGAAATCCTTGATGACGCGCAA CTTTACGCCAGCCAAGCCTTGCAATGGCTAGTTGATGATGGCGTAGCCAAAAGCGTGCAAGTGATTGCCTCCAATCCGCA AATGTCGGTCTTGCTGTTAGAAATCCTTGTGGTGTTGCCCGATGGCAGCACAGAACAACGCACCTTTCGTGCAAATTGGA GTCTCTAA
Upstream 100 bases:
>100_bases TGGGAATATCAACAGCAACCGACCACCAGTCAAGCGGAATCAGCGGAAAAAACCACGACCACGAAGAACGTGTGGGCAAA CCTGTTCCGTAAGGAGCAGT
Downstream 100 bases:
>100_bases TGGCATTTAATACCCCGACACTCTCTACCCTGATTAAACAAGGCGAGCAACAGTTTCAATATCGCTTCCCAACACTTAAA CGACACAATGTGATTGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSDLALTWHNGEGDLVLGTESLLLDDSLTNAIIISLFTDLRVEGERGWWGDSYNDGFQTGSKLWTLSRAKQLPEILDDAQ LYASQALQWLVDDGVAKSVQVIASNPQMSVLLLEILVVLPDGSTEQRTFRANWSL
Sequences:
>Translated_135_residues MSDLALTWHNGEGDLVLGTESLLLDDSLTNAIIISLFTDLRVEGERGWWGDSYNDGFQTGSKLWTLSRAKQLPEILDDAQ LYASQALQWLVDDGVAKSVQVIASNPQMSVLLLEILVVLPDGSTEQRTFRANWSL >Mature_134_residues SDLALTWHNGEGDLVLGTESLLLDDSLTNAIIISLFTDLRVEGERGWWGDSYNDGFQTGSKLWTLSRAKQLPEILDDAQL YASQALQWLVDDGVAKSVQVIASNPQMSVLLLEILVVLPDGSTEQRTFRANWSL
Specific function: Unknown
COG id: COG4381
COG function: function code S; Mu-like prophage protein gp46
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To phage Mu protein gp46
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): VG46_HAEIN (P44239)
Other databases:
- EMBL: L42023 - PIR: F64034 - RefSeq: NP_439668.1 - GeneID: 950384 - GenomeReviews: L42023_GR - KEGG: hin:HI1519 - NMPDR: fig|71421.1.peg.1446 - TIGR: HI_1519 - HOGENOM: HBG754744 - OMA: DAEFYAR - BioCyc: HINF71421:HI_1519-MONOMER - InterPro: IPR010877
Pfam domain/function: PF07409 GP46
EC number: NA
Molecular weight: Translated: 14965; Mature: 14834
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLALTWHNGEGDLVLGTESLLLDDSLTNAIIISLFTDLRVEGERGWWGDSYNDGFQTG CCCEEEEEECCCCCEEECCHHEEECCCHHHHHHHEEHHHHEECCCCCCCCCCCCCCCCCC SKLWTLSRAKQLPEILDDAQLYASQALQWLVDDGVAKSVQVIASNPQMSVLLLEILVVLP HHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHHCC DGSTEQRTFRANWSL CCCCCCEEEEECCCC >Mature Secondary Structure SDLALTWHNGEGDLVLGTESLLLDDSLTNAIIISLFTDLRVEGERGWWGDSYNDGFQTG CCEEEEEECCCCCEEECCHHEEECCCHHHHHHHEEHHHHEECCCCCCCCCCCCCCCCCC SKLWTLSRAKQLPEILDDAQLYASQALQWLVDDGVAKSVQVIASNPQMSVLLLEILVVLP HHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHHHHCC DGSTEQRTFRANWSL CCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800