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The map label for this gene is ymfP [C]

Identifier: 16273420

GI number: 16273420

Start: 1589241

End: 1590308

Strand: Direct

Name: ymfP [C]

Synonym: HI1520

Alternate gene names: 16273420

Gene position: 1589241-1590308 (Clockwise)

Preceding gene: 16273419

Following gene: 30995455

Centisome position: 86.84

GC content: 48.22

Gene sequence:

>1068_bases
ATGGCATTTAATACCCCGACACTCTCTACCCTGATTAAACAAGGCGAGCAACAGTTTCAATATCGCTTCCCAACACTTAA
ACGACACAATGTGATTGGCGTGATTAACCGCATTTGTGCAGCATTAAGTGCCGGCGAACATATGCACTTGGACTGGCTCG
CACGCCAAATTATCCCCACCACCGCGGAAGAAGACTATTTAATCGAATACTGCCTCTATAAAGGCATTGTACGCAAACAA
GCCTCAACCGCCACGGGATTAGTGACTGTGACCGCAGCCAACGACACTACAATCCCCGCAGGCACAGTGTTTGAAGATAC
CAACACAGGGCTGACCTTTATCACCACCCAAGAAACCGTGGTAAAAGCCGGCACCGCTGATATTGCGGTGAAATGTGAAA
CCACAGGCGTAGAAGGTAATTTAAAAGCCGGTACAAGCCTTTCACTGACCTCGGCAATTTTGGGCTTATTGCCCACCGCA
ACCGTCAAAGTAATGAGCGGTGGCGCGGACATTGAATCCCTTTCGCGTTTATTAGCACGCCTAATTTATCGGGTTCAGTA
CCCGCCAGCTGGTGGAGCATCACATGATTATATACGTTGGGCAACGGAGGTGCCTGGTGTTACTAGAGCTTGGTGTTTCG
AACGCTATTATGGTGGTGGCACAGTTGGCGTAGCATTTGCTTGTGATGAACGTGAAGATATTTTACCAACGCCAGAAGAT
ATTGCCCGTGTGCGTGCCTATATCGAAGGACATAAGAATGAAGTAACAGGACAATTTGAAGGCATGCCAGCAAATGTAGA
ACTGTATGTCTTCGCACCACAGTTTCAAGCGGTCAATTTTAAGATCCGTCTTGCACCTAATACGCCAACCTTACGCCAAG
CAGTACGTAAAAGCCTTGCTGCTTATCTTGCCAACGCTGGCGTGGGGGCGTTGCTCTATCTTTCGCAAATTCGTGCGACC
GTTTCCAACACCGCAGGCGAAGTCGATAACAGCGTGATTTTTCCAACCGCAGATGTGCAATTGTTAAGCGATAACATCGC
TATCCTAGGAGACATCGAATGGCTATGA

Upstream 100 bases:

>100_bases
CCTCCAATCCGCAAATGTCGGTCTTGCTGTTAGAAATCCTTGTGGTGTTGCCCGATGGCAGCACAGAACAACGCACCTTT
CGTGCAAATTGGAGTCTCTA

Downstream 100 bases:

>100_bases
CCCACGCCAGTATTTAGACGCGGCGATAAAATTGCTCCCAGTAGGGTTAGCGTGGAAACGAGCGTTAGACAGCAATCTTG
CCAAGGTGCTTGCCGTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MAFNTPTLSTLIKQGEQQFQYRFPTLKRHNVIGVINRICAALSAGEHMHLDWLARQIIPTTAEEDYLIEYCLYKGIVRKQ
ASTATGLVTVTAANDTTIPAGTVFEDTNTGLTFITTQETVVKAGTADIAVKCETTGVEGNLKAGTSLSLTSAILGLLPTA
TVKVMSGGADIESLSRLLARLIYRVQYPPAGGASHDYIRWATEVPGVTRAWCFERYYGGGTVGVAFACDEREDILPTPED
IARVRAYIEGHKNEVTGQFEGMPANVELYVFAPQFQAVNFKIRLAPNTPTLRQAVRKSLAAYLANAGVGALLYLSQIRAT
VSNTAGEVDNSVIFPTADVQLLSDNIAILGDIEWL

Sequences:

>Translated_355_residues
MAFNTPTLSTLIKQGEQQFQYRFPTLKRHNVIGVINRICAALSAGEHMHLDWLARQIIPTTAEEDYLIEYCLYKGIVRKQ
ASTATGLVTVTAANDTTIPAGTVFEDTNTGLTFITTQETVVKAGTADIAVKCETTGVEGNLKAGTSLSLTSAILGLLPTA
TVKVMSGGADIESLSRLLARLIYRVQYPPAGGASHDYIRWATEVPGVTRAWCFERYYGGGTVGVAFACDEREDILPTPED
IARVRAYIEGHKNEVTGQFEGMPANVELYVFAPQFQAVNFKIRLAPNTPTLRQAVRKSLAAYLANAGVGALLYLSQIRAT
VSNTAGEVDNSVIFPTADVQLLSDNIAILGDIEWL
>Mature_354_residues
AFNTPTLSTLIKQGEQQFQYRFPTLKRHNVIGVINRICAALSAGEHMHLDWLARQIIPTTAEEDYLIEYCLYKGIVRKQA
STATGLVTVTAANDTTIPAGTVFEDTNTGLTFITTQETVVKAGTADIAVKCETTGVEGNLKAGTSLSLTSAILGLLPTAT
VKVMSGGADIESLSRLLARLIYRVQYPPAGGASHDYIRWATEVPGVTRAWCFERYYGGGTVGVAFACDEREDILPTPEDI
ARVRAYIEGHKNEVTGQFEGMPANVELYVFAPQFQAVNFKIRLAPNTPTLRQAVRKSLAAYLANAGVGALLYLSQIRATV
SNTAGEVDNSVIFPTADVQLLSDNIAILGDIEWL

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VG47_HAEIN (P44240)

Other databases:

- EMBL:   L42023
- PIR:   G64034
- RefSeq:   NP_439669.1
- GeneID:   950385
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1520
- NMPDR:   fig|71421.1.peg.1447
- TIGR:   HI_1520
- HOGENOM:   HBG754743
- OMA:   ITRAWTY
- ProtClustDB:   CLSK881232
- BioCyc:   HINF71421:HI_1520-MONOMER
- InterPro:   IPR006949

Pfam domain/function: PF04865 Baseplate_J

EC number: NA

Molecular weight: Translated: 38452; Mature: 38321

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNTPTLSTLIKQGEQQFQYRFPTLKRHNVIGVINRICAALSAGEHMHLDWLARQIIPT
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
TAEEDYLIEYCLYKGIVRKQASTATGLVTVTAANDTTIPAGTVFEDTNTGLTFITTQETV
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCEEEEEECHHH
VKAGTADIAVKCETTGVEGNLKAGTSLSLTSAILGLLPTATVKVMSGGADIESLSRLLAR
EECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
LIYRVQYPPAGGASHDYIRWATEVPGVTRAWCFERYYGGGTVGVAFACDEREDILPTPED
HHHEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHH
IARVRAYIEGHKNEVTGQFEGMPANVELYVFAPQFQAVNFKIRLAPNTPTLRQAVRKSLA
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHH
AYLANAGVGALLYLSQIRATVSNTAGEVDNSVIFPTADVQLLSDNIAILGDIEWL
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCEEEEEECCCC
>Mature Secondary Structure 
AFNTPTLSTLIKQGEQQFQYRFPTLKRHNVIGVINRICAALSAGEHMHLDWLARQIIPT
CCCCHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
TAEEDYLIEYCLYKGIVRKQASTATGLVTVTAANDTTIPAGTVFEDTNTGLTFITTQETV
CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEECCCCCEEEEEECHHH
VKAGTADIAVKCETTGVEGNLKAGTSLSLTSAILGLLPTATVKVMSGGADIESLSRLLAR
EECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
LIYRVQYPPAGGASHDYIRWATEVPGVTRAWCFERYYGGGTVGVAFACDEREDILPTPED
HHHEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCHHH
IARVRAYIEGHKNEVTGQFEGMPANVELYVFAPQFQAVNFKIRLAPNTPTLRQAVRKSLA
HHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCEEEEEEEEEECCCCHHHHHHHHHHHH
AYLANAGVGALLYLSQIRATVSNTAGEVDNSVIFPTADVQLLSDNIAILGDIEWL
HHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800