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The map label for this gene is muB

Identifier: 16273385

GI number: 16273385

Start: 1564041

End: 1564904

Strand: Direct

Name: muB

Synonym: HI1481

Alternate gene names: NA

Gene position: 1564041-1564904 (Clockwise)

Preceding gene: 16273383

Following gene: 16273386

Centisome position: 85.46

GC content: 47.69

Gene sequence:

>864_bases
ATGACACTAATCAACAAACTCAAACAACACTTAAGCGACAGCCAAATCACCCAAGCCCAGCTTGCCCGCGAAGCAGGCGT
AAATGCAGGTGCATTGTCGGCATACCTTAACGATAACTACAAAGGCAATATTGCAGATGTGGAAGCAAAACTGGCAGCTT
ACCTTGAGAAAAAAGCGGTGCAAGCCCGCGAGTTTGTAGAGGCACCAGCCTTTATCGAAACAGCGACTTCTCGTCAAATT
TTCAAAACGCTGGAATTTGCCCAAATCGCCAACTGCTTAGCGACTGTTTACGGCATGAGTGGCGTAGGTAAAACCAAAGC
GATCCAAGAGTTCGCCAAAAGTCACGCTAACGTGTGGCTGGTAACTGCAAGCCCTAGTCGTTCAAGTTTAAGCGAAATTT
TGTATGAAATCGCCCTTGAGTTAGGCATCAGCGACGCACCACGCAGAAAAGGCACACTCTCACGCCTGATTGCTCGCAAA
ATCAAAGGCACAGAGGGCTTGCTGATTGTGGATGAAGCCGACCACCTTCCTTATGAGGCACTCGAAGAACTCCGTATTAT
GCAAGAAGAAGCCGGTATTGGCTTAGTGTTGGTAGGCAACGACAAAGTCTATACCCGAATGAAAGGCGGTATTAGCCCAA
GCCACGAATATGCAAGATTGTGGTCGCGCGTGGCAAAAAACACCAGCATTCAGAAAACTAAAAAAGCAGACACGCAAGCA
GTCGCTCAAGCGTGGGGGTTAGAAACCGACGAAGAAGCCTTAAAAGTGATGCAAAGCATTACCGAAACAGGCGGTGGTTT
GCGAATTTTAACCCAAACCTACGCTTGCAGGAATGGTAGCAAAAGGATCTGGCAAGTTGATTGA

Upstream 100 bases:

>100_bases
GTGTTGCCACGGAGTAGAGCTTAACAGGTTGGCGAACCATTTTTAACAGTAAATCAGTTTCAGACATAACGCCCCCAAAG
GTAAAAACAGGAAACCCATT

Downstream 100 bases:

>100_bases
TGCCGACTTAATCATTAAAGCTCGCCAAGAGTTATTAGGAAAAGGCGAATAGGAAGATTTATGCAAAAAGTCTACAACAA
AATGGCAGGCGAAATGATGA

Product: DNA transposition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTLINKLKQHLSDSQITQAQLAREAGVNAGALSAYLNDNYKGNIADVEAKLAAYLEKKAVQAREFVEAPAFIETATSRQI
FKTLEFAQIANCLATVYGMSGVGKTKAIQEFAKSHANVWLVTASPSRSSLSEILYEIALELGISDAPRRKGTLSRLIARK
IKGTEGLLIVDEADHLPYEALEELRIMQEEAGIGLVLVGNDKVYTRMKGGISPSHEYARLWSRVAKNTSIQKTKKADTQA
VAQAWGLETDEEALKVMQSITETGGGLRILTQTYACRNGSKRIWQVD

Sequences:

>Translated_287_residues
MTLINKLKQHLSDSQITQAQLAREAGVNAGALSAYLNDNYKGNIADVEAKLAAYLEKKAVQAREFVEAPAFIETATSRQI
FKTLEFAQIANCLATVYGMSGVGKTKAIQEFAKSHANVWLVTASPSRSSLSEILYEIALELGISDAPRRKGTLSRLIARK
IKGTEGLLIVDEADHLPYEALEELRIMQEEAGIGLVLVGNDKVYTRMKGGISPSHEYARLWSRVAKNTSIQKTKKADTQA
VAQAWGLETDEEALKVMQSITETGGGLRILTQTYACRNGSKRIWQVD
>Mature_286_residues
TLINKLKQHLSDSQITQAQLAREAGVNAGALSAYLNDNYKGNIADVEAKLAAYLEKKAVQAREFVEAPAFIETATSRQIF
KTLEFAQIANCLATVYGMSGVGKTKAIQEFAKSHANVWLVTASPSRSSLSEILYEIALELGISDAPRRKGTLSRLIARKI
KGTEGLLIVDEADHLPYEALEELRIMQEEAGIGLVLVGNDKVYTRMKGGISPSHEYARLWSRVAKNTSIQKTKKADTQAV
AQAWGLETDEEALKVMQSITETGGGLRILTQTYACRNGSKRIWQVD

Specific function: This protein is a non-specific DNA-binding and ATP- hydrolyzing protein essential for bacteriophage integration and replication

COG id: COG2842

COG function: function code R; Uncharacterized ATPase, putative transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VPB_HAEIN (P96343)

Other databases:

- EMBL:   L42023
- PIR:   C64126
- RefSeq:   NP_439632.1
- ProteinModelPortal:   P96343
- GeneID:   950585
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1481
- NMPDR:   fig|71421.1.peg.1412
- TIGR:   HI_1481
- HOGENOM:   HBG353892
- OMA:   NTRRMSK
- ProtClustDB:   CLSK2461500
- BioCyc:   HINF71421:HI_1481-MONOMER
- InterPro:   IPR009084
- InterPro:   IPR001387
- Gene3D:   G3DSA:1.10.1180.10
- SMART:   SM00530

Pfam domain/function: PF09077 Phage-MuB_C; SSF47681 B_transpositn_C

EC number: NA

Molecular weight: Translated: 31488; Mature: 31357

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLINKLKQHLSDSQITQAQLAREAGVNAGALSAYLNDNYKGNIADVEAKLAAYLEKKAV
CCHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QAREFVEAPAFIETATSRQIFKTLEFAQIANCLATVYGMSGVGKTKAIQEFAKSHANVWL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE
VTASPSRSSLSEILYEIALELGISDAPRRKGTLSRLIARKIKGTEGLLIVDEADHLPYEA
EECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
LEELRIMQEEAGIGLVLVGNDKVYTRMKGGISPSHEYARLWSRVAKNTSIQKTKKADTQA
HHHHHHHHHHCCEEEEEECCCEEEEHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
VAQAWGLETDEEALKVMQSITETGGGLRILTQTYACRNGSKRIWQVD
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCEEECC
>Mature Secondary Structure 
TLINKLKQHLSDSQITQAQLAREAGVNAGALSAYLNDNYKGNIADVEAKLAAYLEKKAV
CHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
QAREFVEAPAFIETATSRQIFKTLEFAQIANCLATVYGMSGVGKTKAIQEFAKSHANVWL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEE
VTASPSRSSLSEILYEIALELGISDAPRRKGTLSRLIARKIKGTEGLLIVDEADHLPYEA
EECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
LEELRIMQEEAGIGLVLVGNDKVYTRMKGGISPSHEYARLWSRVAKNTSIQKTKKADTQA
HHHHHHHHHHCCEEEEEECCCEEEEHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
VAQAWGLETDEEALKVMQSITETGGGLRILTQTYACRNGSKRIWQVD
HHHHHCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800