| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is 16273386
Identifier: 16273386
GI number: 16273386
Start: 1564965
End: 1565282
Strand: Direct
Name: 16273386
Synonym: HI1482
Alternate gene names: NA
Gene position: 1564965-1565282 (Clockwise)
Preceding gene: 16273385
Following gene: 16273387
Centisome position: 85.51
GC content: 39.31
Gene sequence:
>318_bases ATGCAAAAAGTCTACAACAAAATGGCAGGCGAAATGATGAGCCCTCGCAATGCCGTTATCCATAACCAATTAGCTATGCT TGAACTTGCCACACTTGAGTGCGAAGCATTAGGCATTGAAGTGGAAACCGTCGAATGGTTCGATATTGGTAAACCCCGCC TTGTCGTAAAAGATTGCTCAGCTTTGCGCCATTTAATTAAGACTGGTAAAGCCTTTAATTATGGCTCAGAAGTGAAAAAC GGCATCCGTATTTACCTAAATCAAATGATGGTAAAAGGCGTAAAATTTATTTGGAAATCAGATGTAACTAAACATTAA
Upstream 100 bases:
>100_bases TTGCAGGAATGGTAGCAAAAGGATCTGGCAAGTTGATTGATGCCGACTTAATCATTAAAGCTCGCCAAGAGTTATTAGGA AAAGGCGAATAGGAAGATTT
Downstream 100 bases:
>100_bases CCACAGGAGAAACTATGGCAACGAAAGTAAAAAGCCAAGCGAAATTACGCTTTGTAAGCGTAGAACAGGTGCAAAGTGCG ATTAAAGAAATTGGCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MQKVYNKMAGEMMSPRNAVIHNQLAMLELATLECEALGIEVETVEWFDIGKPRLVVKDCSALRHLIKTGKAFNYGSEVKN GIRIYLNQMMVKGVKFIWKSDVTKH
Sequences:
>Translated_105_residues MQKVYNKMAGEMMSPRNAVIHNQLAMLELATLECEALGIEVETVEWFDIGKPRLVVKDCSALRHLIKTGKAFNYGSEVKN GIRIYLNQMMVKGVKFIWKSDVTKH >Mature_105_residues MQKVYNKMAGEMMSPRNAVIHNQLAMLELATLECEALGIEVETVEWFDIGKPRLVVKDCSALRHLIKTGKAFNYGSEVKN GIRIYLNQMMVKGVKFIWKSDVTKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1482_HAEIN (P44210)
Other databases:
- EMBL: L42023 - PIR: D64031 - RefSeq: NP_439633.1 - GeneID: 950568 - GenomeReviews: L42023_GR - KEGG: hin:HI1482 - NMPDR: fig|71421.1.peg.1413 - TIGR: HI_1482 - OMA: RIILREN - ProtClustDB: CLSK217645 - BioCyc: HINF71421:HI_1482-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11985; Mature: 11985
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKVYNKMAGEMMSPRNAVIHNQLAMLELATLECEALGIEVETVEWFDIGKPRLVVKDCS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEHHHHHH ALRHLIKTGKAFNYGSEVKNGIRIYLNQMMVKGVKFIWKSDVTKH HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQKVYNKMAGEMMSPRNAVIHNQLAMLELATLECEALGIEVETVEWFDIGKPRLVVKDCS CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEHHHHHH ALRHLIKTGKAFNYGSEVKNGIRIYLNQMMVKGVKFIWKSDVTKH HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023