| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16273383
Identifier: 16273383
GI number: 16273383
Start: 1563332
End: 1563604
Strand: Direct
Name: 16273383
Synonym: HI1479
Alternate gene names: NA
Gene position: 1563332-1563604 (Clockwise)
Preceding gene: 16273382
Following gene: 16273385
Centisome position: 85.42
GC content: 41.39
Gene sequence:
>273_bases ATGAGCAATATCACATTAAACGAAAACGCAATGCTTTATTTAAAAGCAGACTATTATCGCCCTGAAATGCCCACTTTTAA AGCCTGCTATTTCCGATTAAGCAAAATTGCCCAAGAACAAGGCTGGGGAACATTGCCGAATTTAGCCCAAACCAAAGCCC TGTTTAAAGCGGCAGTCCCTGAGATTATTTGGACGAGAGAGGCGTTTAAGCGTGCCAATACTCAAAAGAAACACGCACAT AAGGCAACGCCTTATCTTGAACAAGTAATGTAA
Upstream 100 bases:
>100_bases GGGAAAAGGGTTTAGAGCTTTTAAAGAAAAGTAAAGGGCGTTAAACCAACCGCCTTTAAACCAGATTTAAACAGGGTTTA AACGCCCTAAGGAGAACAAG
Downstream 100 bases:
>100_bases TTCGAGCAGCAAAACTCTCAGGTAACAGCACATAAAACGGAGCTGGCAAGTTAGATAAATCAAGTGGTTCAGAGCCTATT TTGTTCAACTCTAACACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSNITLNENAMLYLKADYYRPEMPTFKACYFRLSKIAQEQGWGTLPNLAQTKALFKAAVPEIIWTREAFKRANTQKKHAH KATPYLEQVM
Sequences:
>Translated_90_residues MSNITLNENAMLYLKADYYRPEMPTFKACYFRLSKIAQEQGWGTLPNLAQTKALFKAAVPEIIWTREAFKRANTQKKHAH KATPYLEQVM >Mature_89_residues SNITLNENAMLYLKADYYRPEMPTFKACYFRLSKIAQEQGWGTLPNLAQTKALFKAAVPEIIWTREAFKRANTQKKHAHK ATPYLEQVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1479_HAEIN (P44208)
Other databases:
- EMBL: L42023 - PIR: B64031 - RefSeq: NP_439630.1 - ProteinModelPortal: P44208 - SMR: P44208 - GeneID: 950355 - GenomeReviews: L42023_GR - KEGG: hin:HI1479 - NMPDR: fig|71421.1.peg.1410 - TIGR: HI_1479 - BioCyc: HINF71421:HI_1479-MONOMER - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR015126 - Gene3D: G3DSA:1.10.10.60
Pfam domain/function: PF09039 Mu_I-gamma; SSF46689 Homeodomain_like
EC number: NA
Molecular weight: Translated: 10467; Mature: 10336
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNITLNENAMLYLKADYYRPEMPTFKACYFRLSKIAQEQGWGTLPNLAQTKALFKAAVP CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EIIWTREAFKRANTQKKHAHKATPYLEQVM HHHHHHHHHHHCCCHHHHHHCCCHHHHHCC >Mature Secondary Structure SNITLNENAMLYLKADYYRPEMPTFKACYFRLSKIAQEQGWGTLPNLAQTKALFKAAVP CCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH EIIWTREAFKRANTQKKHAHKATPYLEQVM HHHHHHHHHHHCCCHHHHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800