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The map label for this gene is glgB [H]

Identifier: 16273267

GI number: 16273267

Start: 1436783

End: 1438975

Strand: Direct

Name: glgB [H]

Synonym: HI1357

Alternate gene names: 16273267

Gene position: 1436783-1438975 (Clockwise)

Preceding gene: 16273266

Following gene: 16273268

Centisome position: 78.51

GC content: 42.68

Gene sequence:

>2193_bases
ATGACAACCGCAGTAACACAAGCAATTATTGATGGTTTTTTTGATGCGAGCAATGGTGATCCTTTTGCTACGCTTGGTAT
GCACGAAACCGAGCAAGGAATTGAAATCCGTACGTTATTGCCAGATGCCAATCGAATGGTGGTGATTGAGCGTGAAAGTG
GTAAAGAAATAACGGAACTGGATTGTGTCGATGAGCGTGGATTTTTTGTTGGTGTTATTCCAAATTGTCGTCAATTTTTT
GCTTATCAATTACAGGTTTTTTGGGGTAATGAAGCACAAATTATCGAAGATCCTTATCGTTTTCATCCAATGATTGACGA
TTTAGAACAATGGCTACTTTCTGAAGGATCTATGCTTCGCCCATATGAAGTGCTTGGTGCGCATTTTATGGAATGTGATG
GTGTGAGCGGGGTGAATTTCCGCTTGTGGGCACCTAATGCAAGACGAGTTTCTATTGTAGGTGATTTCAACTATTGGGAT
GGTCGTCGCCACCCGATGCGTTTCCACTCGAAAAGTGGTGTTTGGGAGCTCTTTTTACCAAAAGCCAGTTTAGGACAGCT
CTATAAGTTTGAATTAATTGATTGCCATGGCAATCTTCGTTTGAAGGCCGATCCATTTGCCTTTAGTTCGCAACTTCGCC
CTGATACAGCTTCGCAAGTCAGTGCCTTGCCAAATGTAGTGGAAATGACTGAAGCACGCAAAAAAGCAAACCAAGGCAAC
CAACCAATTTCTATTTATGAAGTGCATTTAGGATCTTGGCGTCGTAATTTAGAAAACAATTTTTGGCTAGATTACGATCA
AATTGCTGATGAATTAATTCCTTATGTAAAAGAGATGGGCTTTACCCATATAGAATTTTTACCGCTTTCTGAATTTCCGT
TTGATGGTTCTTGGGGTTATCAACCACTTGGGCTTTATTCGCCAACCAGTCGCTTTGGTTCACCTGAAGCCTTCCGCCGT
TTAGTAAAACGTGCTCACGAAGCAGGCATCAACGTGATTTTAGATTGGGTGCCAGGGCATTTCCCAAGTGATACGCATGG
TTTAGTCGCATTTGATGGCACAGCTTTGTATGAGCATGAAGACCCTCGCGAAGGCTATCATCAAGATTGGAATACCTTGA
TTTATAACTATGGGCGTAATGAGGTCAAAAATTTCTTATCCAGTAATGCACTGTATTGGCTTGAACGTTTTGGCGTAGAT
GGTATTCGCGTGGATGCTGTGGCTTCCATGATTTACCGTGATTATAGCCGTGCGGAGGGCGAGTGGATTCCAAACCAATA
CGGCGGACGTGAAAATTTAGAAGCCATTGAGTTTTTAAAACACACCAACTGGAAAATTCACAGCGAAATGGCGGGAGCAA
TTTCTATTGCGGAGGAATCTACCTCTTTTGCAGGCGTAACCCACCCAAGCGAAAACGGCGGCTTGGGCTTCAATTTCAAA
TGGAATATGGGCTGGATGAACGATACACTGGCTTATATGAAGCTTGACCCCATTTACCGCCAATATCATCACAACAAAAT
GACCTTTGGAATGGTGTATCAATATAGCGAAAATTTTGTGCTACCACTTTCTCACGATGAAGTGGTTCACGGTAAATATT
CACTTCTTGGCAAGATGCCAGGTGATACGTGGCAAAAATTCGCTAACTTGCGTGCATATTACGGTTATATGTGGGGCTAC
CCAGGCAAAAAATTACTCTTTATGGGGAATGAATTTGCTCAAGGCAGAGAATGGAATTACGAAGAAAGTTTGGACTGGTT
CTTGCTTGATGAAAATATTGGCGGAGGCTGGCATAAAGGCGTATTGAAGCTGGTTAAAGACCTCAATCAAATTTATCAAA
AAAATCGACCGCTCTTTGAGCTCGACAACTCCCCAGAGGGTTTCGATTGGCTTGTCGTTGATGATGCGGCAAATTCTGTG
CTCGCCTTTGAACGTCGCAGTTCAAACGGAGAACGTATTATTGTCGTCAGTAACTTTACCCCTGTGCCTCGCCACAATTA
CCGCATCGGCGTGAATGTTGCAGGAAAATACGAAGAAATTTTAAATACCGATTCGATGTATTACGAAGGTTCAAACGTGG
GCAATTTTGGTTGTGTCGCAAGTGAACAAATCGAAAGCCACGGACGAGAAAATTCGATTTCAGTGTCCATTCCGCCGTTA
GCAACAGTTTATTTGAGATTGAAGACGAAATAA

Upstream 100 bases:

>100_bases
CAAGAAACTTGCTCAACCGTTAGCGTTTATTTTTAGCAATGAAGCTTTAAAAACGTTCTTTGTGCAAATTAACCAAGGGC
GAAATGTATAAGGAGTAAAT

Downstream 100 bases:

>100_bases
TCCGAATAGATAAATTGTAGGGGCGAATTACATTCGCCTGATAAACCACCGATGTTTTTGGGCAAATGTAATTTGCCTAC
AAAATCGATAAAAATATGTT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 730; Mature: 729

Protein sequence:

>730_residues
MTTAVTQAIIDGFFDASNGDPFATLGMHETEQGIEIRTLLPDANRMVVIERESGKEITELDCVDERGFFVGVIPNCRQFF
AYQLQVFWGNEAQIIEDPYRFHPMIDDLEQWLLSEGSMLRPYEVLGAHFMECDGVSGVNFRLWAPNARRVSIVGDFNYWD
GRRHPMRFHSKSGVWELFLPKASLGQLYKFELIDCHGNLRLKADPFAFSSQLRPDTASQVSALPNVVEMTEARKKANQGN
QPISIYEVHLGSWRRNLENNFWLDYDQIADELIPYVKEMGFTHIEFLPLSEFPFDGSWGYQPLGLYSPTSRFGSPEAFRR
LVKRAHEAGINVILDWVPGHFPSDTHGLVAFDGTALYEHEDPREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVD
GIRVDAVASMIYRDYSRAEGEWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFK
WNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMVYQYSENFVLPLSHDEVVHGKYSLLGKMPGDTWQKFANLRAYYGYMWGY
PGKKLLFMGNEFAQGREWNYEESLDWFLLDENIGGGWHKGVLKLVKDLNQIYQKNRPLFELDNSPEGFDWLVVDDAANSV
LAFERRSSNGERIIVVSNFTPVPRHNYRIGVNVAGKYEEILNTDSMYYEGSNVGNFGCVASEQIESHGRENSISVSIPPL
ATVYLRLKTK

Sequences:

>Translated_730_residues
MTTAVTQAIIDGFFDASNGDPFATLGMHETEQGIEIRTLLPDANRMVVIERESGKEITELDCVDERGFFVGVIPNCRQFF
AYQLQVFWGNEAQIIEDPYRFHPMIDDLEQWLLSEGSMLRPYEVLGAHFMECDGVSGVNFRLWAPNARRVSIVGDFNYWD
GRRHPMRFHSKSGVWELFLPKASLGQLYKFELIDCHGNLRLKADPFAFSSQLRPDTASQVSALPNVVEMTEARKKANQGN
QPISIYEVHLGSWRRNLENNFWLDYDQIADELIPYVKEMGFTHIEFLPLSEFPFDGSWGYQPLGLYSPTSRFGSPEAFRR
LVKRAHEAGINVILDWVPGHFPSDTHGLVAFDGTALYEHEDPREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVD
GIRVDAVASMIYRDYSRAEGEWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFK
WNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMVYQYSENFVLPLSHDEVVHGKYSLLGKMPGDTWQKFANLRAYYGYMWGY
PGKKLLFMGNEFAQGREWNYEESLDWFLLDENIGGGWHKGVLKLVKDLNQIYQKNRPLFELDNSPEGFDWLVVDDAANSV
LAFERRSSNGERIIVVSNFTPVPRHNYRIGVNVAGKYEEILNTDSMYYEGSNVGNFGCVASEQIESHGRENSISVSIPPL
ATVYLRLKTK
>Mature_729_residues
TTAVTQAIIDGFFDASNGDPFATLGMHETEQGIEIRTLLPDANRMVVIERESGKEITELDCVDERGFFVGVIPNCRQFFA
YQLQVFWGNEAQIIEDPYRFHPMIDDLEQWLLSEGSMLRPYEVLGAHFMECDGVSGVNFRLWAPNARRVSIVGDFNYWDG
RRHPMRFHSKSGVWELFLPKASLGQLYKFELIDCHGNLRLKADPFAFSSQLRPDTASQVSALPNVVEMTEARKKANQGNQ
PISIYEVHLGSWRRNLENNFWLDYDQIADELIPYVKEMGFTHIEFLPLSEFPFDGSWGYQPLGLYSPTSRFGSPEAFRRL
VKRAHEAGINVILDWVPGHFPSDTHGLVAFDGTALYEHEDPREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDG
IRVDAVASMIYRDYSRAEGEWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFKW
NMGWMNDTLAYMKLDPIYRQYHHNKMTFGMVYQYSENFVLPLSHDEVVHGKYSLLGKMPGDTWQKFANLRAYYGYMWGYP
GKKLLFMGNEFAQGREWNYEESLDWFLLDENIGGGWHKGVLKLVKDLNQIYQKNRPLFELDNSPEGFDWLVVDDAANSVL
AFERRSSNGERIIVVSNFTPVPRHNYRIGVNVAGKYEEILNTDSMYYEGSNVGNFGCVASEQIESHGRENSISVSIPPLA
TVYLRLKTK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=654, Percent_Identity=26.7584097859327, Blast_Score=172, Evalue=1e-42,
Organism=Escherichia coli, GI1789839, Length=725, Percent_Identity=64.4137931034483, Blast_Score=1020, Evalue=0.0,
Organism=Escherichia coli, GI2367229, Length=343, Percent_Identity=28.2798833819242, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17554896, Length=376, Percent_Identity=28.7234042553192, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI32564391, Length=265, Percent_Identity=31.3207547169811, Blast_Score=136, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6320826, Length=650, Percent_Identity=25.0769230769231, Blast_Score=160, Evalue=6e-40,
Organism=Drosophila melanogaster, GI28573410, Length=686, Percent_Identity=28.2798833819242, Blast_Score=190, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 83821; Mature: 83690

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAVTQAIIDGFFDASNGDPFATLGMHETEQGIEIRTLLPDANRMVVIERESGKEITEL
CCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEEE
DCVDERGFFVGVIPNCRQFFAYQLQVFWGNEAQIIEDPYRFHPMIDDLEQWLLSEGSMLR
EEECCCCEEEEECCCHHHEEEEEEEEEECCCCEEECCCHHCCCHHHHHHHHHHCCCCCCC
PYEVLGAHFMECDGVSGVNFRLWAPNARRVSIVGDFNYWDGRRHPMRFHSKSGVWELFLP
HHHHHCCHHEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEEC
KASLGQLYKFELIDCHGNLRLKADPFAFSSQLRPDTASQVSALPNVVEMTEARKKANQGN
CCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCC
QPISIYEVHLGSWRRNLENNFWLDYDQIADELIPYVKEMGFTHIEFLPLSEFPFDGSWGY
CCEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
QPLGLYSPTSRFGSPEAFRRLVKRAHEAGINVILDWVPGHFPSDTHGLVAFDGTALYEHE
CCCCCCCCHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCEEEECCC
DPREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDGIRVDAVASMIYRDYSRAEG
CCCCCHHCCCHHEEEECCHHHHHHHHHCCCEEHHHHHCCCCEEHHHHHHHHHHHHHHCCC
EWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFK
CCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEECCCCCCCCCEEEEEE
WNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMVYQYSENFVLPLSHDEVVHGKYSLLGKMP
EECCCCCCCEEEEEECHHHHHHCCCCEEEEEEEEECCCEEEECCCCCEECCCHHEEECCC
GDTWQKFANLRAYYGYMWGYPGKKLLFMGNEFAQGREWNYEESLDWFLLDENIGGGWHKG
CHHHHHHHHHHHHHHHEECCCCCEEEEECCHHCCCCCCCCCCCCCEEEEECCCCCHHHHH
VLKLVKDLNQIYQKNRPLFELDNSPEGFDWLVVDDAANSVLAFERRSSNGERIIVVSNFT
HHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCC
PVPRHNYRIGVNVAGKYEEILNTDSMYYEGSNVGNFGCVASEQIESHGRENSISVSIPPL
CCCCCCEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCC
ATVYLRLKTK
EEEEEEEECC
>Mature Secondary Structure 
TTAVTQAIIDGFFDASNGDPFATLGMHETEQGIEIRTLLPDANRMVVIERESGKEITEL
CHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEECCCCCCEEEE
DCVDERGFFVGVIPNCRQFFAYQLQVFWGNEAQIIEDPYRFHPMIDDLEQWLLSEGSMLR
EEECCCCEEEEECCCHHHEEEEEEEEEECCCCEEECCCHHCCCHHHHHHHHHHCCCCCCC
PYEVLGAHFMECDGVSGVNFRLWAPNARRVSIVGDFNYWDGRRHPMRFHSKSGVWELFLP
HHHHHCCHHEECCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEEC
KASLGQLYKFELIDCHGNLRLKADPFAFSSQLRPDTASQVSALPNVVEMTEARKKANQGN
CCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCC
QPISIYEVHLGSWRRNLENNFWLDYDQIADELIPYVKEMGFTHIEFLPLSEFPFDGSWGY
CCEEEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
QPLGLYSPTSRFGSPEAFRRLVKRAHEAGINVILDWVPGHFPSDTHGLVAFDGTALYEHE
CCCCCCCCHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCEEEECCC
DPREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDGIRVDAVASMIYRDYSRAEG
CCCCCHHCCCHHEEEECCHHHHHHHHHCCCEEHHHHHCCCCEEHHHHHHHHHHHHHHCCC
EWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFK
CCCCCCCCCCCCHHHHHHHHHCCCEEECCCCCEEEEECCCCCEEECCCCCCCCCEEEEEE
WNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMVYQYSENFVLPLSHDEVVHGKYSLLGKMP
EECCCCCCCEEEEEECHHHHHHCCCCEEEEEEEEECCCEEEECCCCCEECCCHHEEECCC
GDTWQKFANLRAYYGYMWGYPGKKLLFMGNEFAQGREWNYEESLDWFLLDENIGGGWHKG
CHHHHHHHHHHHHHHHEECCCCCEEEEECCHHCCCCCCCCCCCCCEEEEECCCCCHHHHH
VLKLVKDLNQIYQKNRPLFELDNSPEGFDWLVVDDAANSVLAFERRSSNGERIIVVSNFT
HHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCC
PVPRHNYRIGVNVAGKYEEILNTDSMYYEGSNVGNFGCVASEQIESHGRENSISVSIPPL
CCCCCCEEEEEEECCCHHHHHCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCC
ATVYLRLKTK
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA