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The map label for this gene is 16272876

Identifier: 16272876

GI number: 16272876

Start: 997770

End: 998486

Strand: Direct

Name: 16272876

Synonym: HI0939

Alternate gene names: NA

Gene position: 997770-998486 (Clockwise)

Preceding gene: 16272875

Following gene: 16272877

Centisome position: 54.52

GC content: 32.5

Gene sequence:

>717_bases
ATGATGAAAGTATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGTCTTTGTCGTCTTTATTATTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACGCAAAATCAACACATGTTATTACATTTAAAATTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCTATTTTTATTAGCCAAGAAGATAATGCGCCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGGTGTATTGGCAAAGGTTCGCCGAAAACCTGTATGAAAAAAGGTAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACTAAACTGACTTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGTAACGCTGGTGGTGGATGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAGGTTACAATTTAATTGGTTAATTGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACCCCAAATATCAGTTATGAAACATCCCTTGTTGTTGTGCTCTGGAATCAAAAATAA

Upstream 100 bases:

>100_bases
GCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTGTGAAAACTAATCAA
TTTGATAGTGCTTGTAATTA

Downstream 100 bases:

>100_bases
TGACTATACAAAAAGGCATTATCACGCTGACTATTCTGATTTTTATTTCAGGTTTATTAACTGCGTTTTTATTGTTGGAT
GACAGCCATTTAAGTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MMKVLLKGQTLLALMISLSLSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVVLWNQK

Sequences:

>Translated_238_residues
MMKVLLKGQTLLALMISLSLSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVVLWNQK
>Mature_238_residues
MMKVLLKGQTLLALMISLSLSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVVLWNQK

Specific function: Unknown

COG id: COG4795

COG function: function code U; Type II secretory pathway, component PulJ

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y939_HAEIN (P44080)

Other databases:

- EMBL:   L42023
- PIR:   H64016
- RefSeq:   NP_439099.1
- GeneID:   949939
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0939
- NMPDR:   fig|71421.1.peg.905
- TIGR:   HI_0939
- HOGENOM:   HBG297131
- OMA:   PPNSCVL
- ProtClustDB:   CLSK870311
- BioCyc:   HINF71421:HI_0939-MONOMER
- InterPro:   IPR016419
- PIRSF:   PIRSF004525

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26788; Mature: 26788

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcaee6f0)-;

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKVLLKGQTLLALMISLSLSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIG
CEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEEEEEHHHHHHHHHHHH
KDLRRLGFRALNAKLTESNLSLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGK
HHHHHHHHHHHCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCC
GSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSVIPTNCTAETCKRAFQQTACN
CCCHHHHHCCCCCCCCCHHHHHCEECCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCC
AGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVVLWNQK
CCCCCHHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEECCH
>Mature Secondary Structure
MMKVLLKGQTLLALMISLSLSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIG
CEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEEEEEHHHHHHHHHHHH
KDLRRLGFRALNAKLTESNLSLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGK
HHHHHHHHHHHCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCC
GSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSVIPTNCTAETCKRAFQQTACN
CCCHHHHHCCCCCCCCCHHHHHCEECCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCC
AGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVVLWNQK
CCCCCHHHCCCCCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCEEEEEEEEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800