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The map label for this gene is 16272875

Identifier: 16272875

GI number: 16272875

Start: 997258

End: 997770

Strand: Direct

Name: 16272875

Synonym: HI0938

Alternate gene names: NA

Gene position: 997258-997770 (Clockwise)

Preceding gene: 16272865

Following gene: 16272876

Centisome position: 54.49

GC content: 34.5

Gene sequence:

>513_bases
ATGCAGAAAGGTATGACATTAGTGGAATTATTGATTGGGTTAGCCATTATCAGTATTGCGCTGAATTTTGCAGTACCATT
ATGGAAAACCGATTCACCTAAAACGATTTTAGCCAAAGAGCAACATCGCCTGTATTTATTTCTACGCCAAATTCAGGCTC
GGGCAGAAAATTCATCGGAAGTGTGGTTTTTACTTATCAATCGTAATCTTGCGACACAGCAATGGTGCTTAACGGCACAA
GTAAAAAATAACCAAACTTGTGATTGTTTAAATCCGATAAATTGCCCGAAAGAGGTTTATGCTCATTTTTACTACCCTTA
TTTTCCTAACAAAACGATGATTCAAAGTCATCATATTTATCCAAAAGAAATCACGAGATTTGATGGCATTCGTAATACTA
TTGTTACTCGTTGCTTTATTTTGCAAGCTGAAAATGAACGTACGTTATTTTTATTTTTCAATGTTGGCAGTATTCGTGTG
AAAACTAATCAATTTGATAGTGCTTGTAATTAA

Upstream 100 bases:

>100_bases
TTTCAGAAAAACTTTGCGATACAGATCGCKAAAATCAGATCAAGTGATTTTTCTACCCATTCATTTATGGTTAAAGTGCG
GTGGAAAATTGGAGCGTTTT

Downstream 100 bases:

>100_bases
TGATGAAAGTATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCACTGTCTTTGTCGTCTTTATTATTGCTAAGC
ATTTCGCATTTTTATGTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRV
KTNQFDSACN

Sequences:

>Translated_170_residues
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRV
KTNQFDSACN
>Mature_170_residues
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSEVWFLLINRNLATQQWCLTAQ
VKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIYPKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRV
KTNQFDSACN

Specific function: Unknown

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y938_HAEIN (P44079)

Other databases:

- EMBL:   L42023
- PIR:   G64016
- RefSeq:   NP_439098.1
- GeneID:   949906
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0938
- NMPDR:   fig|71421.1.peg.904
- TIGR:   HI_0938
- HOGENOM:   HBG297132
- OMA:   CFTAQIK
- ProtClustDB:   CLSK870312
- BioCyc:   HINF71421:HI_0938-MONOMER
- InterPro:   IPR012902
- TIGRFAMs:   TIGR02532

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19835; Mature: 19835

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdae7078)-;

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSE
CCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCC
VWFLLINRNLATQQWCLTAQVKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIY
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEECCCCC
PKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRVKTNQFDSACN
HHHHHHHCCHHHHHHHEEEEEEECCCCEEEEEEECCEEEEECCCCCCCCH
>Mature Secondary Structure
MQKGMTLVELLIGLAIISIALNFAVPLWKTDSPKTILAKEQHRLYLFLRQIQARAENSSE
CCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCC
VWFLLINRNLATQQWCLTAQVKNNQTCDCLNPINCPKEVYAHFYYPYFPNKTMIQSHHIY
EEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEECCCCC
PKEITRFDGIRNTIVTRCFILQAENERTLFLFFNVGSIRVKTNQFDSACN
HHHHHHHCCHHHHHHHEEEEEEECCCCEEEEEEECCEEEEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800