| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is 16272867
Identifier: 16272867
GI number: 16272867
Start: 988828
End: 989448
Strand: Reverse
Name: 16272867
Synonym: HI0930
Alternate gene names: NA
Gene position: 989448-988828 (Counterclockwise)
Preceding gene: 30995410
Following gene: 16272866
Centisome position: 54.06
GC content: 41.38
Gene sequence:
>621_bases ATGGCTAGGCGTAAAAACCATTCGATAAAAATTGAGAACAATGAAAAAGAAAATCAGATTTTAGTTAGTTTATCTATTGT GGCCTTATTAGGAGGCTGTTCAGAAGAGCAAGTACAACGCGATGTATATCAGTCTTTAGACGATTGTTTAGCGGATTGGA AAAAAATTGAGCTTTGTGAGGCAGATAAAAATACTGAAAGTACTCAGAAAACTGCAACTACACAACAGCAGGGGCTGGGT TTAAATATTCGTGATAATGGTAATGCAGAAAGTGCGGTAAAAAATCCAGCTGAAAATAATGCACAAGCTAATCAAAGCGA GAACAGAGCTGAATCAACTACAAAAGCTGAAAGTACCGATCCTTCTTTAGGAGCCGCAATTGCTGGTGGCGTTATAGGGT ATATGGCGGCTCGTGCAATTAGTAGTTTCCTTGGCCCAAGCTATCATCCTGGAAATCGAGCTGTCACCACACCAACAGGG CAAGTTGTGCAACCGCAAACAAATCGCTCTGTTGGAAAACCAATGCTCGTGAAAGGAAATGCAGGAAGCATGAATAGCAA ACCTGTATCTCGTGGTGGTTTTAGTAGCCCAAATAAAACTCATCGTAGCAGTGGGGGCTAA
Upstream 100 bases:
>100_bases ATTTTGCCCGTTTAGTCGGCTATAACAGCAATAAATATCCACAACCAGATTTAATGAGCATGTGGACTCGTGAAGAAATT ACTAATAAACAGGCCGAGCA
Downstream 100 bases:
>100_bases ATGAAACGTGTAACTGGGTTTCCTACTCGACCAGATATGGTGCAACAGCTACTTAATGTTGGATTTGATTATTATAACTT GCCTTCCAGTGATGGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MARRKNHSIKIENNEKENQILVSLSIVALLGGCSEEQVQRDVYQSLDDCLADWKKIELCEADKNTESTQKTATTQQQGLG LNIRDNGNAESAVKNPAENNAQANQSENRAESTTKAESTDPSLGAAIAGGVIGYMAARAISSFLGPSYHPGNRAVTTPTG QVVQPQTNRSVGKPMLVKGNAGSMNSKPVSRGGFSSPNKTHRSSGG
Sequences:
>Translated_206_residues MARRKNHSIKIENNEKENQILVSLSIVALLGGCSEEQVQRDVYQSLDDCLADWKKIELCEADKNTESTQKTATTQQQGLG LNIRDNGNAESAVKNPAENNAQANQSENRAESTTKAESTDPSLGAAIAGGVIGYMAARAISSFLGPSYHPGNRAVTTPTG QVVQPQTNRSVGKPMLVKGNAGSMNSKPVSRGGFSSPNKTHRSSGG >Mature_205_residues ARRKNHSIKIENNEKENQILVSLSIVALLGGCSEEQVQRDVYQSLDDCLADWKKIELCEADKNTESTQKTATTQQQGLGL NIRDNGNAESAVKNPAENNAQANQSENRAESTTKAESTDPSLGAAIAGGVIGYMAARAISSFLGPSYHPGNRAVTTPTGQ VVQPQTNRSVGKPMLVKGNAGSMNSKPVSRGGFSSPNKTHRSSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y930_HAEIN (P44077)
Other databases:
- EMBL: L42023 - PIR: E64016 - RefSeq: NP_439090.1 - GeneID: 949932 - GenomeReviews: L42023_GR - KEGG: hin:HI0930 - NMPDR: fig|71421.1.peg.896 - TIGR: HI_0930 - HOGENOM: HBG495011 - OMA: QANQSEN - ProtClustDB: CLSK808467 - BioCyc: HINF71421:HI_0930-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21841; Mature: 21710
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRKNHSIKIENNEKENQILVSLSIVALLGGCSEEQVQRDVYQSLDDCLADWKKIELCE CCCCCCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEHHC ADKNTESTQKTATTQQQGLGLNIRDNGNAESAVKNPAENNAQANQSENRAESTTKAESTD CCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC PSLGAAIAGGVIGYMAARAISSFLGPSYHPGNRAVTTPTGQVVQPQTNRSVGKPMLVKGN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCEEEECC AGSMNSKPVSRGGFSSPNKTHRSSGG CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARRKNHSIKIENNEKENQILVSLSIVALLGGCSEEQVQRDVYQSLDDCLADWKKIELCE CCCCCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEHHC ADKNTESTQKTATTQQQGLGLNIRDNGNAESAVKNPAENNAQANQSENRAESTTKAESTD CCCCCCHHHHHHHHHHHCCCEEECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCC PSLGAAIAGGVIGYMAARAISSFLGPSYHPGNRAVTTPTGQVVQPQTNRSVGKPMLVKGN CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCEEEECC AGSMNSKPVSRGGFSSPNKTHRSSGG CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800