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The map label for this gene is ygiC [C]

Identifier: 16272866

GI number: 16272866

Start: 987646

End: 988827

Strand: Reverse

Name: ygiC [C]

Synonym: HI0929

Alternate gene names: 16272866

Gene position: 988827-987646 (Counterclockwise)

Preceding gene: 16272867

Following gene: 16272864

Centisome position: 54.03

GC content: 37.48

Gene sequence:

>1182_bases
ATGAAACGTGTAACTGGGTTTCCTACTCGACCAGATATGGTGCAACAGCTACTTAATGTTGGATTTGATTATTATAACTT
GCCTTCCAGTGATGGATCTCATTATTGGTCTGATAATGTCGCCTATGAATTTACCTTAGCGGAAATTGATCGCATTGAGG
ATACAACTAATGAATTGCATTCAATGTGTTTAGATTTTGCGGCGGATGAAATTAAAAAAGGCGATTATGAAAATTATCAT
TTTACGGAGTTGCAAAAACAGCTTATTGAAACCTCTTGGCGTAATCAAGAACCTTATTTATATGGACGCTTTGATTTTGG
CTATGATGGCAACAACCTAAAAATGTTTGAATATAACGCCGATACACCAACATCTTTGTTGGAGGCAGCGGTTGTCCAAT
GGCAGTGGTTGGAGCAAATTGAGGGCTTGAAACATCGTGATCAATTTAACTGGATTCATGAAGAATTAATAAAACATTTC
CAATTTTTAAAACAACAAAGTGGCAAAACAGATTTCCATTTGAGTGCCATGCAGGATGCTGGCCGTGAAGATTGGGGCAA
TGTGGATTATTTAGCTGATGTGGCTTATAACGCAGGTTGGAATATTCATCAATTAGCGGTGGAAGATATTGGCTATAACA
GCGAAACAAAAAAATTTGTAGATTTAAATGATCAACCTATTGAAATGTTATTTAAATTGTATCCGCTAGAATGGCTAAGC
CACGCTGAGTTTGCTCGCCATATTACAACGGCTGAAACACGATTTATTGAACCAGCGTGGAAAATGTTGTTAAGTAATAA
AGCACTATTGGCAAAACTTTGGGCGCGTTATCCTAATCATCCGCATTTATTGCCTGCTTATTTTACGCCTTTCGAACTAC
CAAAAGATTTATCGATGTGGGTGAAAAAACCATTGTTAGGTCGAGAAGGTGCCAATGTTTTCTATTATGAGAAAAATAAT
GGTGTAGAATTTGCAGCGAAAGGAAGCGAACACTCAACGTTTTATGGTAATTCAGGTTATGTTTATCAACAAAAATTTGA
ATTGCCAAGTTTTGATGGAATGTATCCAATTATCGGCTCTTGGGTTGTGGGTGATGTGGCTTGTGGAATGGGCTTACGTG
AAGATTTTACTGCAGTGACGGGTAATGATAGCCATTTTATACCTCATTATTTTGTGCCATGA

Upstream 100 bases:

>100_bases
AATGCTCGTGAAAGGAAATGCAGGAAGCATGAATAGCAAACCTGTATCTCGTGGTGGTTTTAGTAGCCCAAATAAAACTC
ATCGTAGCAGTGGGGGCTAA

Downstream 100 bases:

>100_bases
TATATATTTAGCATTACTTAAATACAATATTTACCATAAAAAATGGAAGCTATTATAGGTTATTTTTACATTCAAATTTT
TGAACGATTACAAAATCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHSMCLDFAADEIKKGDYENYH
FTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNADTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP

Sequences:

>Translated_393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHSMCLDFAADEIKKGDYENYH
FTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNADTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
>Mature_393_residues
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELHSMCLDFAADEIKKGDYENYH
FTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNADTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHF
QFLKQQSGKTDFHLSAMQDAGREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLS
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMWVKKPLLGREGANVFYYEKNN
GVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGSWVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC

Homologues:

Organism=Escherichia coli, GI1789416, Length=398, Percent_Identity=40.2010050251256, Blast_Score=266, Evalue=1e-72,
Organism=Escherichia coli, GI1790629, Length=394, Percent_Identity=39.3401015228426, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1789361, Length=379, Percent_Identity=27.9683377308707, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y929_HAEIN (P44940)

Other databases:

- EMBL:   L42023
- PIR:   F64161
- RefSeq:   NP_439089.1
- ProteinModelPortal:   P44940
- SMR:   P44940
- GeneID:   949927
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0929
- NMPDR:   fig|71421.1.peg.895
- TIGR:   HI_0929
- HOGENOM:   HBG320655
- OMA:   ALLPMLW
- ProtClustDB:   CLSK808466
- BioCyc:   HINF71421:HI_0929-MONOMER
- InterPro:   IPR005494
- InterPro:   IPR016185

Pfam domain/function: PF03738 GSP_synth; SSF52440 PreATP-grasp-like

EC number: NA

Molecular weight: Translated: 45793; Mature: 45793

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELH
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHH
SMCLDFAADEIKKGDYENYHFTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECC
DTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHFQFLKQQSGKTDFHLSAMQDA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
GREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLS
CCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
VKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGS
HHCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHH
WVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKRVTGFPTRPDMVQQLLNVGFDYYNLPSSDGSHYWSDNVAYEFTLAEIDRIEDTTNELH
CCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCEECCCCEEEEEHHHHHHHHHHHHHHH
SMCLDFAADEIKKGDYENYHFTELQKQLIETSWRNQEPYLYGRFDFGYDGNNLKMFEYNA
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEECC
DTPTSLLEAAVVQWQWLEQIEGLKHRDQFNWIHEELIKHFQFLKQQSGKTDFHLSAMQDA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
GREDWGNVDYLADVAYNAGWNIHQLAVEDIGYNSETKKFVDLNDQPIEMLFKLYPLEWLS
CCCCCCCHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
HAEFARHITTAETRFIEPAWKMLLSNKALLAKLWARYPNHPHLLPAYFTPFELPKDLSMW
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
VKKPLLGREGANVFYYEKNNGVEFAAKGSEHSTFYGNSGYVYQQKFELPSFDGMYPIIGS
HHCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHH
WVVGDVACGMGLREDFTAVTGNDSHFIPHYFVP
HHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800