| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is gpmA [H]
Identifier: 16272698
GI number: 16272698
Start: 821450
End: 822133
Strand: Direct
Name: gpmA [H]
Synonym: HI0757
Alternate gene names: 16272698
Gene position: 821450-822133 (Clockwise)
Preceding gene: 16272695
Following gene: 16272700
Centisome position: 44.88
GC content: 37.13
Gene sequence:
>684_bases ATGGAATTAGTATTTATCCGTCACGGTTTTAGTGAATGGAATGCGAAAAACTTATTCACAGGCTGGCGTGATGTGAATTT AACTGAACGTGGTGTGGAAGAAGCAAAAACTGCGGGTAAAAAACTGTTAGACAAAGGTTATGAATTTGATATCGCATTTA CCTCTGTTTTAACTCGAGCAATCAAAACTTGTAACATCGTGTTAGAAGAATCCCATCAATTATGGATTCCGCAAGTAAAA AACTGGCGTTTAAATGAACGTCATTATGGTGCTTTACAAGGTTTAGATAAAAAAGCGACTGCGGAGCAATACGGTGACGA ACAAGTTCATATTTGGCGTCGTTCTTACGACATTTCTCCACCAGATTTAGATCCACAAGATCCAAATTCTGCACACAATG ACCGTCGCTACGCAAATATTCCATCTGATGTTGTGCCAAACGCAGAAAATTTAAAATTAACATTAGAACGTGCATTACCA TTCTGGGAAGATCAAATTGCACCAGCAATGCTTTCTGGCAAACGTGTTTTAGTGGTTGCTCACGGAAATTCACTTCGTGC GTTGGCAAAACATATTATCGGTATTTCTGATGCTGAAATTATGGATTTTGAAATTCCAACAGGCCAACCTTTAGTATTAA AACTAGATGATAAATTAAATTACGTAGAACATTACTATCTTTAA
Upstream 100 bases:
>100_bases TTGCTAAAGATCAGGAAATCATCCCTTTTAACTTTTAAAGCTAAGGATTTTTTGCTATAAAATGTGCGTTCTTTTTATTT GAAAAAATTAGGAGATTCTT
Downstream 100 bases:
>100_bases TTAAGTTCAACGTATTGTTGTTCTAACTGTATAAAACAAAACCCCGCAAATTAGCGGGGTTTTTAAGCAAGTCCAAATTA TTTTGTGCTTGGAATTTTGA
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKTAGKKLLDKGYEFDIAFTSVLTRAIKTCNIVLEESHQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANIPSDVVPNAENLKLTLERALP FWEDQIAPAMLSGKRVLVVAHGNSLRALAKHIIGISDAEIMDFEIPTGQPLVLKLDDKLNYVEHYYL
Sequences:
>Translated_227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKTAGKKLLDKGYEFDIAFTSVLTRAIKTCNIVLEESHQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANIPSDVVPNAENLKLTLERALP FWEDQIAPAMLSGKRVLVVAHGNSLRALAKHIIGISDAEIMDFEIPTGQPLVLKLDDKLNYVEHYYL >Mature_227_residues MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKTAGKKLLDKGYEFDIAFTSVLTRAIKTCNIVLEESHQLWIPQVK NWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANIPSDVVPNAENLKLTLERALP FWEDQIAPAMLSGKRVLVVAHGNSLRALAKHIIGISDAEIMDFEIPTGQPLVLKLDDKLNYVEHYYL
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=220, Percent_Identity=51.8181818181818, Blast_Score=246, Evalue=9e-66, Organism=Homo sapiens, GI4505753, Length=224, Percent_Identity=52.2321428571429, Blast_Score=234, Evalue=3e-62, Organism=Homo sapiens, GI4502445, Length=225, Percent_Identity=48.4444444444444, Blast_Score=230, Evalue=8e-61, Organism=Homo sapiens, GI40353764, Length=225, Percent_Identity=48.4444444444444, Blast_Score=230, Evalue=8e-61, Organism=Homo sapiens, GI71274132, Length=224, Percent_Identity=50.4464285714286, Blast_Score=224, Evalue=6e-59, Organism=Homo sapiens, GI310129614, Length=161, Percent_Identity=54.0372670807453, Blast_Score=167, Evalue=5e-42, Organism=Escherichia coli, GI1786970, Length=226, Percent_Identity=52.6548672566372, Blast_Score=253, Evalue=7e-69, Organism=Saccharomyces cerevisiae, GI6322697, Length=227, Percent_Identity=51.5418502202643, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324516, Length=280, Percent_Identity=31.4285714285714, Blast_Score=125, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6320183, Length=282, Percent_Identity=30.4964539007092, Blast_Score=120, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324857, Length=108, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646216, Length=221, Percent_Identity=49.7737556561086, Blast_Score=222, Evalue=1e-58, Organism=Drosophila melanogaster, GI85725270, Length=224, Percent_Identity=51.7857142857143, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI85725272, Length=224, Percent_Identity=51.7857142857143, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI24650981, Length=224, Percent_Identity=51.7857142857143, Blast_Score=216, Evalue=1e-56, Organism=Drosophila melanogaster, GI28571815, Length=219, Percent_Identity=38.8127853881278, Blast_Score=164, Evalue=4e-41, Organism=Drosophila melanogaster, GI24648979, Length=219, Percent_Identity=38.8127853881278, Blast_Score=164, Evalue=4e-41, Organism=Drosophila melanogaster, GI28571817, Length=219, Percent_Identity=38.8127853881278, Blast_Score=164, Evalue=4e-41,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 26049; Mature: 26049
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKTAGKKLLDKGYEFDIAFTSVLTRA CEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH IKTCNIVLEESHQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISP HHHHHEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCC PDLDPQDPNSAHNDRRYANIPSDVVPNAENLKLTLERALPFWEDQIAPAMLSGKRVLVVA CCCCCCCCCCCCCCCEECCCCHHHCCCCCCEEEEHHHCCCCCHHHCCHHHHCCCEEEEEE HGNSLRALAKHIIGISDAEIMDFEIPTGQPLVLKLDDKLNYVEHYYL CCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHCC >Mature Secondary Structure MELVFIRHGFSEWNAKNLFTGWRDVNLTERGVEEAKTAGKKLLDKGYEFDIAFTSVLTRA CEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH IKTCNIVLEESHQLWIPQVKNWRLNERHYGALQGLDKKATAEQYGDEQVHIWRRSYDISP HHHHHEEEECCCCEECCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCCEEEEEEEECCCCC PDLDPQDPNSAHNDRRYANIPSDVVPNAENLKLTLERALPFWEDQIAPAMLSGKRVLVVA CCCCCCCCCCCCCCCEECCCCHHHCCCCCCEEEEHHHCCCCCHHHCCHHHHCCCEEEEEE HGNSLRALAKHIIGISDAEIMDFEIPTGQPLVLKLDDKLNYVEHYYL CCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA