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The map label for this gene is hel

Identifier: 16272635

GI number: 16272635

Start: 737422

End: 738246

Strand: Direct

Name: hel

Synonym: HI0693

Alternate gene names: 16272635

Gene position: 737422-738246 (Clockwise)

Preceding gene: 16272633

Following gene: 16272636

Centisome position: 40.29

GC content: 40.36

Gene sequence:

>825_bases
ATGAAAACAACGTTAAAAATGACCGCACTTGCGGCTCTTTCTGCTTTTGTTTTAGCTGGCTGTGGTTCACACCAAATGAA
ATCAGAAGGACATGCAAATATGCAATTACAACAACAAGCGGTGCTTGGATTAAACTGGATGCAAGATTCTGGCGAATATA
AAGCATTAGCTTATCAAGCGTACAATGCGGCAAAAGTTGCATTTGATCACGCAAAAGTGGCAAAAGGTAAGAAAAAAGCG
GTTGTGGCTGATTTAGATGAAACTATGTTAGACAACAGCCCTTATGCTGGCTGGCAAGTTCAAAATAACAAACCATTCGA
TGGTAAAGATTGGACTCGTTGGGTAGACGCACGTCAATCTCGTGCCGTTCCGGGTGCGGTAGAATTTAATAATTATGTAA
ACAGCCACAACGGTAAAGTGTTCTACGTAACAAACCGCAAAGACAGCACTGAAAAATCAGGCACTATCGATGATATGAAA
CGCTTAGGTTTCAATGGCGTGGAAGAATCTGCATTTTATTTGAAAAAAGACAAATCAGCTAAAGCGGCTCGTTTTGCAGA
AATTGAAAAACAAGGCTATGAAATCGTACTTTATGTAGGTGATAACTTAGATGACTTCGGTAATACCGTATATGGCAAAT
TAAACGCTGACCGCCGTGCATTCGTTGATCAAAACCAAGGCAAATTTGGTAAAACTTTCATCATGTTACCTAACGCAAAC
TACGGTGGCTGGGAAGGCGGTTTAGCTGAAGGGTATTTCAAAAAAGATACACAAGGCCAAATCAAAGCTCGTTTAGATGC
AGTACAAGCTTGGGATGGTAAATAA

Upstream 100 bases:

>100_bases
TATTTACGGTTATTAATGCCATCTATGATGAAAAACACTTTTCAATTGAAAAGTGTTTTTCAGAAAGACTTACTATACCC
TGAATGAATAGGAACATAAT

Downstream 100 bases:

>100_bases
TTTTCCATTAAAAAGATCGATTTAAATATCGATTTTGAAAATTTAATTGAGGGGCTAAGCTCAGTTTTTACTGGCTTAGC
CTTTTTAATTTTTCAAGTTC

Product: lipoprotein E

Products: NA

Alternate protein names: Outer membrane protein P4; OMP P4

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEGHANMQLQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK

Sequences:

>Translated_274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEGHANMQLQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
>Mature_274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEGHANMQLQQQAVLGLNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK

Specific function: Unknown

COG id: COG2503

COG function: function code R; Predicted secreted acid phosphatase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HEL_HAEIN (P26093)

Other databases:

- EMBL:   M68502
- EMBL:   L42023
- PIR:   B64087
- RefSeq:   NP_438853.1
- PDB:   3OCU
- PDB:   3OCV
- PDB:   3OCW
- PDB:   3OCX
- PDB:   3OCY
- PDBsum:   3OCU
- PDBsum:   3OCV
- PDBsum:   3OCW
- PDBsum:   3OCX
- PDBsum:   3OCY
- ProteinModelPortal:   P26093
- SMR:   P26093
- GeneID:   949723
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0693
- NMPDR:   fig|71421.1.peg.663
- TIGR:   HI_0693
- HOGENOM:   HBG640120
- OMA:   TEWIILP
- ProtClustDB:   CLSK870353
- BioCyc:   HINF71421:HI_0693-MONOMER
- BioCyc:   MetaCyc:MONOMER-8381
- InterPro:   IPR005519
- InterPro:   IPR023214
- InterPro:   IPR006423
- Gene3D:   G3DSA:3.40.50.1000
- PIRSF:   PIRSF019271
- TIGRFAMs:   TIGR01533

Pfam domain/function: PF03767 Acid_phosphat_B; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 30431; Mature: 30431

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLKMTALAALSAFVLAGCGSHQMKSEGHANMQLQQQAVLGLNWMQDSGEYKALAYQA
CCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEHHHHHHCCEEECCCCCEEEEEEEC
YNAAKVAFDHAKVAKGKKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS
CCCHHEEHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHH
RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSA
CCCCCEEECCCHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCC
KAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
HHHHHHHHHHCCCEEEEEECCCCCHHCCEEEEEECCCCHHHCCCCCCCCCCEEEEEECCC
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTTLKMTALAALSAFVLAGCGSHQMKSEGHANMQLQQQAVLGLNWMQDSGEYKALAYQA
CCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEHHHHHHCCEEECCCCCEEEEEEEC
YNAAKVAFDHAKVAKGKKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS
CCCHHEEHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHH
RAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDKSA
CCCCCEEECCCHHCCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCC
KAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
HHHHHHHHHHCCCEEEEEECCCCCHHCCEEEEEECCCCHHHCCCCCCCCCCEEEEEECCC
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1715322; 7542800