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The map label for this gene is 16272608

Identifier: 16272608

GI number: 16272608

Start: 711981

End: 712289

Strand: Reverse

Name: 16272608

Synonym: HI0666.1

Alternate gene names: NA

Gene position: 712289-711981 (Counterclockwise)

Preceding gene: 16272609

Following gene: 16272607

Centisome position: 38.92

GC content: 37.22

Gene sequence:

>309_bases
ATGGACAATCTTAGTGCACAATTAGAAAATCAAATTGATGAATTAAAAAAGCTTCAGAAATCAGTCATTACCTATGAGCA
AGCGCAAAGACAACAACTTTACGCAGGGAAAATTACCGATCTCAAAGCATTTGGAAAAATGCTCAATGATAAGCGTAAAT
CACTTGGTATTGAGCTTAGTATGCTAGAACTGCAAACTGGCGTGTCTATTTCTACCTTGAACCGATTATTTCAAGATCCA
AGCCAAGTGAGATTTACAACCGTGTTTCTTGTTGCTCAAACATTAGGGGTTTCACTATGCGCGATTTAG

Upstream 100 bases:

>100_bases
TCCTCAAATTTTTCCCTAAAAAAAATCAAAAAAGATATTCTAAAAACAAAAAATCATATATGATATAAAATATTTCCATA
AAAAGAAAAAAATATCAAAT

Downstream 100 bases:

>100_bases
TCCGCTCGGGAAAAGTATTTCTCTACGGCGAATTTATTGGCTTACTTAGAGAAGATCATCGTGGTTTTCATTTTTCTTAC
AACCCCGATTATCAAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI

Sequences:

>Translated_102_residues
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI
>Mature_102_residues
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y666A_HAEIN (O86228)

Other databases:

- EMBL:   L42023
- RefSeq:   NP_438826.1
- GeneID:   949707
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0666.1
- NMPDR:   fig|71421.1.peg.636
- TIGR:   HI_0666.1
- HOGENOM:   HBG467982
- OMA:   LENQIDE
- ProtClustDB:   CLSK808437
- BioCyc:   HINF71421:HI_0666.1-MONOMER
- GO:   GO:0006350
- InterPro:   IPR001387
- InterPro:   IPR010982
- SMART:   SM00530

Pfam domain/function: PF01381 HTH_3; SSF47413 Lambda_like_DNA

EC number: NA

Molecular weight: Translated: 11465; Mature: 11465

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH
MLELQTGVSISTLNRLFQDPSQVRFTTVFLVAQTLGVSLCAI
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH
MLELQTGVSISTLNRLFQDPSQVRFTTVFLVAQTLGVSLCAI
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800