| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is yheS [C]
Identifier: 16272601
GI number: 16272601
Start: 700653
End: 702569
Strand: Reverse
Name: yheS [C]
Synonym: HI0658
Alternate gene names: 16272601
Gene position: 702569-700653 (Counterclockwise)
Preceding gene: 16272602
Following gene: 16272600
Centisome position: 38.39
GC content: 40.64
Gene sequence:
>1917_bases ATGATTATATTTAGTAACTTATCCTTAAAACGAGGGCAAACGGAACTTCTCGAAAATGCGTCTGCTACGATTAATCCCAA GCAAAAAGTCGGTTTGGTGGGGAAAAATGGTTGTGGAAAATCTTCGCTTTTTGCCTTATTAAAAAAAGAATTAATGCCAG AGGGCGGTGAGGTGAATTATCCAGCAAATTGGCGGGTATCTTGGGTAAATCAAGAAACGCCTGCATTGGATATTTCTGCG ATTGATTATGTGATTCAAGGGGATCGTGAATATTGCCGTTTGCAACAAAAGCTTGAACGTGCAAATGAACGCAATGACGG TAACGCCATTGCACGCATTCACGGGCAATTAGAAACCTTGGATGCGTGGACAATTCAATCGCGTGCCGCGTCTTTATTGC ATGGTTTAGGATTTAGCCAAGAAGAAACAATACAGCCAGTGAAAGCCTTTTCGGGCGGTTGGCGGATGCGTTTGAATTTG GCACAGGCATTGCTTTGTCCGTCAGATTTATTATTACTGGATGAACCGACGAACCATTTGGATTTGGATGCGGTTATTTG GTTGGAACGATGGTTAGTGCAATATCAAGGCACTTTAGTATTAATTTCTCACGATCGTGATTTTCTTGATCCAATTGTGA CAAAAATCCTCCATATCGAAAATCAGAAGCTCAACGAATACACGGGCGATTATTCTTCCTTTGAAGTGCAACGAGCCACT AAACTGGCTCAACAAACAGCGATGTATCGTCAGCAACAACAAAAGATTTCCCATTTACAAAAATATATTGATCGCTTTAA AGCCAAAGCCACTAAAGCCAAACAGGCACAAAGCCGTATGAAAGCACTAGAAAGAATGGAGCTGATTGCACCTGCTTATG TGGATAATCCTTTTACTTTTGAATTTCGTCCACCGCAATCCTTGCCGAATCCCTTAGTGATGATTGAGCAAGCGAGTGCA GGTTATGGCATCGGCGAAAGTGCGGTAGAAATTTTAAGTAAAATTAAACTGAATTTAGTGCCAGGTTCGCGCATTGGTTT ACTCGGGAAAAATGGTGCAGGAAAATCAACACTGATTAAACTTTTAGCGGGAGAACTGACCGCACTTTCAGGCACGGTAC AATTAGCTAAAGGTGTTCAACTTGGTTATTTTGCTCAGCATCAATTAGATACTTTACGCGCAGACGAATCTGCTCTGTGG CATATGCAAAAACTCGCGCCTGAGCAAACGGAGCAACAAGTTCGGGATTATTTAGGCAGTTTTGCGTTTCACGGCGATAA AGTAAATCAAGCAGTGAAATCTTTTTCTGGAGGAGAAAAAGCTCGTTTGGTGTTGGCTTTGATTGTTTGGCAACGCCCGA ATTTGTTACTACTTGATGAACCGACTAACCATTTGGATTTGGATATGCGTCAAGCATTAACGGAAGCATTGGTGGATTAC GAAGGTTCTTTGGTGGTGGTGTCGCACGATCGTCATTTATTACGCAATACCGTGGAAGAATTTTATTTAGTTCACGATAA AAAAGTGGAAGAATTTAAAGGCGATTTAGAAGACTATCAAAAATGGCTGAGTGAACAAAACAGTACGTCTGAAAATAAAG TTTCGGAAAAAGTGGGCGATAATGAAAATTCGGTTCAAAATCGCAAGGAACAAAAACGCCGTGAAGCAGAGTTACGCCAA CAAACTGCACCATTACGTAAAAAAATCACGCAATTAGAAGAAAAAATGAATAAATTTTCTTCTGAGCTTGCGAACATAGA AAATCAACTGGCAGATACCGAATTATATAATGCCGAAAATAAAGAAAAATTGACCGCACTTTTGGCTCAACAAGTGGATG TGAAGAAAGCATTAGATGATGTAGAAACGGAATGGATGACTGCACAGGAAGAATTGGAAGAAATGCTTCAAGCATAA
Upstream 100 bases:
>100_bases GTGGCTTTTTTGACTAGAAAATCGATAAAATCGGAATAGACTGTTCCGAGAAAAGAAAAAATATTGCAAAATAGCCTCAA ATTAAGACCTATGTAGAAAA
Downstream 100 bases:
>100_bases GGATAGATTATGAATCAAAGCCTTTTTCATCATAGCAAACAACAGGAATATTGCCCTCAATGTGGTGCGCCGTTGCAAAT TAAACAAGGCAAAAAAGGGC
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 638; Mature: 638
Protein sequence:
>638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNYPANWRVSWVNQETPALDISA IDYVIQGDREYCRLQQKLERANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPPQSLPNPLVMIEQASA GYGIGESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELANIENQLADTELYNAENKEKLTALLAQQVDVKKALDDVETEWMTAQEELEEMLQA
Sequences:
>Translated_638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNYPANWRVSWVNQETPALDISA IDYVIQGDREYCRLQQKLERANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPPQSLPNPLVMIEQASA GYGIGESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELANIENQLADTELYNAENKEKLTALLAQQVDVKKALDDVETEWMTAQEELEEMLQA >Mature_638_residues MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNYPANWRVSWVNQETPALDISA IDYVIQGDREYCRLQQKLERANERNDGNAIARIHGQLETLDAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNL AQALLCPSDLLLLDEPTNHLDLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTFEFRPPQSLPNPLVMIEQASA GYGIGESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIKLLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALW HMQKLAPEQTEQQVRDYLGSFAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGDNENSVQNRKEQKRREAELRQ QTAPLRKKITQLEEKMNKFSSELANIENQLADTELYNAENKEKLTALLAQQVDVKKALDDVETEWMTAQEELEEMLQA
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains
Homologues:
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=35.621521335807, Blast_Score=329, Evalue=4e-90, Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=35.621521335807, Blast_Score=329, Evalue=6e-90, Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=34.3396226415094, Blast_Score=328, Evalue=1e-89, Organism=Homo sapiens, GI10947135, Length=553, Percent_Identity=32.5497287522604, Blast_Score=249, Evalue=5e-66, Organism=Homo sapiens, GI69354671, Length=553, Percent_Identity=32.5497287522604, Blast_Score=249, Evalue=7e-66, Organism=Escherichia coli, GI1789751, Length=636, Percent_Identity=68.5534591194968, Blast_Score=914, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=32.9545454545455, Blast_Score=311, Evalue=1e-85, Organism=Escherichia coli, GI1787182, Length=625, Percent_Identity=27.84, Blast_Score=241, Evalue=1e-64, Organism=Escherichia coli, GI2367384, Length=531, Percent_Identity=30.1318267419962, Blast_Score=211, Evalue=8e-56, Organism=Escherichia coli, GI1788165, Length=196, Percent_Identity=32.6530612244898, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI48994997, Length=227, Percent_Identity=24.2290748898678, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1787758, Length=200, Percent_Identity=24.5, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1788002, Length=186, Percent_Identity=32.258064516129, Blast_Score=64, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17553372, Length=537, Percent_Identity=37.0577281191806, Blast_Score=343, Evalue=1e-94, Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=33.5216572504708, Blast_Score=312, Evalue=3e-85, Organism=Caenorhabditis elegans, GI17559834, Length=534, Percent_Identity=32.3970037453184, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17541710, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17556528, Length=236, Percent_Identity=25.4237288135593, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=545, Percent_Identity=34.6788990825688, Blast_Score=333, Evalue=7e-92, Organism=Saccharomyces cerevisiae, GI6320874, Length=532, Percent_Identity=34.3984962406015, Blast_Score=317, Evalue=5e-87, Organism=Saccharomyces cerevisiae, GI6325030, Length=389, Percent_Identity=29.5629820051414, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6324314, Length=388, Percent_Identity=29.3814432989691, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323278, Length=389, Percent_Identity=28.5347043701799, Blast_Score=129, Evalue=2e-30, Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=36.1581920903955, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24642252, Length=546, Percent_Identity=36.8131868131868, Blast_Score=350, Evalue=1e-96, Organism=Drosophila melanogaster, GI18859989, Length=546, Percent_Identity=36.8131868131868, Blast_Score=350, Evalue=1e-96, Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=32.5966850828729, Blast_Score=295, Evalue=8e-80, Organism=Drosophila melanogaster, GI116007184, Length=149, Percent_Identity=35.5704697986577, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=149, Percent_Identity=35.5704697986577, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI45550390, Length=233, Percent_Identity=28.755364806867, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y658_HAEIN (P44808)
Other databases:
- EMBL: L42023 - PIR: C64156 - RefSeq: NP_438818.1 - ProteinModelPortal: P44808 - GeneID: 949699 - GenomeReviews: L42023_GR - KEGG: hin:HI0658 - NMPDR: fig|71421.1.peg.628 - TIGR: HI_0658 - HOGENOM: HBG758042 - OMA: GWIKAYQ - ProtClustDB: CLSK870537 - BioCyc: HINF71421:HI_0658-MONOMER - GO: GO:0006810 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - SMART: SM00382
Pfam domain/function: PF00005 ABC_tran
EC number: NA
Molecular weight: Translated: 72232; Mature: 72232
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNY CEEECCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PANWRVSWVNQETPALDISAIDYVIQGDREYCRLQQKLERANERNDGNAIARIHGQLETL CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH DAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE EFRPPQSLPNPLVMIEQASAGYGIGESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIK EECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHH LLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALWHMQKLAPEQTEQQVRDYLGS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH FAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY HHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGD CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCC NENSVQNRKEQKRREAELRQQTAPLRKKITQLEEKMNKFSSELANIENQLADTELYNAEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEKLTALLAQQVDVKKALDDVETEWMTAQEELEEMLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIFSNLSLKRGQTELLENASATINPKQKVGLVGKNGCGKSSLFALLKKELMPEGGEVNY CEEECCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC PANWRVSWVNQETPALDISAIDYVIQGDREYCRLQQKLERANERNDGNAIARIHGQLETL CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHH DAWTIQSRAASLLHGLGFSQEETIQPVKAFSGGWRMRLNLAQALLCPSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCCCC DLDAVIWLERWLVQYQGTLVLISHDRDFLDPIVTKILHIENQKLNEYTGDYSSFEVQRAT CHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHH KLAQQTAMYRQQQQKISHLQKYIDRFKAKATKAKQAQSRMKALERMELIAPAYVDNPFTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE EFRPPQSLPNPLVMIEQASAGYGIGESAVEILSKIKLNLVPGSRIGLLGKNGAGKSTLIK EECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEECCCCCEEEEECCCCCHHHHHH LLAGELTALSGTVQLAKGVQLGYFAQHQLDTLRADESALWHMQKLAPEQTEQQVRDYLGS HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH FAFHGDKVNQAVKSFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALVDY HHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCC EGSLVVVSHDRHLLRNTVEEFYLVHDKKVEEFKGDLEDYQKWLSEQNSTSENKVSEKVGD CCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHCCC NENSVQNRKEQKRREAELRQQTAPLRKKITQLEEKMNKFSSELANIENQLADTELYNAEN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KEKLTALLAQQVDVKKALDDVETEWMTAQEELEEMLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023