Click here to switch to the map view.

The map label for this gene is yigL [C]

Identifier: 16272540

GI number: 16272540

Start: 619754

End: 620572

Strand: Direct

Name: yigL [C]

Synonym: HI0597

Alternate gene names: 16272540

Gene position: 619754-620572 (Clockwise)

Preceding gene: 16272533

Following gene: 16272541

Centisome position: 33.86

GC content: 36.39

Gene sequence:

>819_bases
ATGAATTTACCTTTTCGAGCAATGGTGTCTGATTTAGATGGCACACTTTTAACACCTGAACATTTAGTCGGTGATCTTAC
CATTGATACGCTGAGAGCATTAGAGCAAAAAGGCGTAGATATTATTTTGGCAACAGGACGCAATCATACCGATGTGTCAT
CCATTCTTGGAAAAATTGGTGCGGAACGTGCGGTTATGATTACATCAAACGGTGCTCGTGTACGGGATTTACAGGGTAAT
TTGCTTTATAGCAATAGTTTGCCTGAAGAATTAGTTCTTGAGCTTTACAAAACGCCATTTGATACTTCCAAAGTATGCAT
GAATAGCTATCAAGATGAAGGTTGGTTTACTAATAAAGATATTCCTGCAATGCGTCAGTTCCATAAAGAATCTGGATTCG
ATTATAACGTTGTCGATTTTTCTAAACATCATGGACGTGGGACAGAAAAAGTCTTTTTTATTGGTAAAACGCCAGAGGAT
TTAGTTGAAGTAGAAACTTATTTACGAGATAAGTTTGGTGACGTAACGACAATTGTTTATTCAGCATTAGCTTGTTTGGA
AGTAATGAATAAGAATGTTTCAAAAGGGGATGCATTAAAACATTTACTCGAATCACGCGAGTATGAGTTAAAAGACTGTA
TTGCTTTTGGTGATGGAATGAATGATGTAGAAATGCTTTCTTGGGCTGGAAAAGGTTGCATTATGAAAGATGCTGATATT
CGTTTAAAAATGGCTTGTCCAGAGTTAGAAGTTATTGGCTCAAATAAAGAAGAATCAGTCGCTCGTTATTTGCGAACCCA
ATTTGGATTAGATTATTAA

Upstream 100 bases:

>100_bases
TGCGGTTATTTTTATTGCAGTTTTTAATATATTGATCTTCAGCAAGTACCATTTGTATATTTAGTGATATGATAAACATA
GTTTATTTTTTGAGGTTTTT

Downstream 100 bases:

>100_bases
TGCAGGCATTATTATTCATAAGTTATGGTGCAATATTAGGCGCGTCATTGCGTTGGGCTATAGGATTGTTATTTAATCCT
TTATTTTCCTCATTTGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNLPFRAMVSDLDGTLLTPEHLVGDLTIDTLRALEQKGVDIILATGRNHTDVSSILGKIGAERAVMITSNGARVRDLQGN
LLYSNSLPEELVLELYKTPFDTSKVCMNSYQDEGWFTNKDIPAMRQFHKESGFDYNVVDFSKHHGRGTEKVFFIGKTPED
LVEVETYLRDKFGDVTTIVYSALACLEVMNKNVSKGDALKHLLESREYELKDCIAFGDGMNDVEMLSWAGKGCIMKDADI
RLKMACPELEVIGSNKEESVARYLRTQFGLDY

Sequences:

>Translated_272_residues
MNLPFRAMVSDLDGTLLTPEHLVGDLTIDTLRALEQKGVDIILATGRNHTDVSSILGKIGAERAVMITSNGARVRDLQGN
LLYSNSLPEELVLELYKTPFDTSKVCMNSYQDEGWFTNKDIPAMRQFHKESGFDYNVVDFSKHHGRGTEKVFFIGKTPED
LVEVETYLRDKFGDVTTIVYSALACLEVMNKNVSKGDALKHLLESREYELKDCIAFGDGMNDVEMLSWAGKGCIMKDADI
RLKMACPELEVIGSNKEESVARYLRTQFGLDY
>Mature_272_residues
MNLPFRAMVSDLDGTLLTPEHLVGDLTIDTLRALEQKGVDIILATGRNHTDVSSILGKIGAERAVMITSNGARVRDLQGN
LLYSNSLPEELVLELYKTPFDTSKVCMNSYQDEGWFTNKDIPAMRQFHKESGFDYNVVDFSKHHGRGTEKVFFIGKTPED
LVEVETYLRDKFGDVTTIVYSALACLEVMNKNVSKGDALKHLLESREYELKDCIAFGDGMNDVEMLSWAGKGCIMKDADI
RLKMACPELEVIGSNKEESVARYLRTQFGLDY

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family

Homologues:

Organism=Escherichia coli, GI48994981, Length=264, Percent_Identity=43.5606060606061, Blast_Score=226, Evalue=1e-60,
Organism=Escherichia coli, GI87081741, Length=268, Percent_Identity=38.8059701492537, Blast_Score=178, Evalue=3e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y597_HAEIN (P44771)

Other databases:

- EMBL:   L42023
- PIR:   D64155
- RefSeq:   NP_438754.1
- ProteinModelPortal:   P44771
- SMR:   P44771
- GeneID:   950123
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0597
- NMPDR:   fig|71421.1.peg.566
- TIGR:   HI_0597
- HOGENOM:   HBG728500
- OMA:   ERAVMIT
- ProtClustDB:   CLSK870548
- BioCyc:   HINF71421:HI_0597-MONOMER
- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150
- Gene3D:   G3DSA:3.40.50.1000
- TIGRFAMs:   TIGR00099
- TIGRFAMs:   TIGR01484

Pfam domain/function: PF08282 Hydrolase_3; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 30523; Mature: 30523

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS01228 COF_1; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPFRAMVSDLDGTLLTPEHLVGDLTIDTLRALEQKGVDIILATGRNHTDVSSILGKIG
CCCCHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC
AERAVMITSNGARVRDLQGNLLYSNSLPEELVLELYKTPFDTSKVCMNSYQDEGWFTNKD
CCCEEEEECCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
IPAMRQFHKESGFDYNVVDFSKHHGRGTEKVFFIGKTPEDLVEVETYLRDKFGDVTTIVY
CHHHHHHHHHCCCCCCEEECHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHH
SALACLEVMNKNVSKGDALKHLLESREYELKDCIAFGDGMNDVEMLSWAGKGCIMKDADI
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCC
RLKMACPELEVIGSNKEESVARYLRTQFGLDY
EEEEECCCEEEECCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLPFRAMVSDLDGTLLTPEHLVGDLTIDTLRALEQKGVDIILATGRNHTDVSSILGKIG
CCCCHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHC
AERAVMITSNGARVRDLQGNLLYSNSLPEELVLELYKTPFDTSKVCMNSYQDEGWFTNKD
CCCEEEEECCCCEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCC
IPAMRQFHKESGFDYNVVDFSKHHGRGTEKVFFIGKTPEDLVEVETYLRDKFGDVTTIVY
CHHHHHHHHHCCCCCCEEECHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHH
SALACLEVMNKNVSKGDALKHLLESREYELKDCIAFGDGMNDVEMLSWAGKGCIMKDADI
HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCEEECCCC
RLKMACPELEVIGSNKEESVARYLRTQFGLDY
EEEEECCCEEEECCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800