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The map label for this gene is rseC [C]

Identifier: 16272533

GI number: 16272533

Start: 610691

End: 611110

Strand: Direct

Name: rseC [C]

Synonym: HI0589

Alternate gene names: 16272533

Gene position: 610691-611110 (Clockwise)

Preceding gene: 16272532

Following gene: 16272540

Centisome position: 33.37

GC content: 41.67

Gene sequence:

>420_bases
GTGATGAGCTATGATGCAGAAACGGGCATTGCTAAAGTAAAATGTCAATCACAAAGCACCTGTGGGGCTTGTTCGGCTAG
AGAAACCTGTGGAACAGAGTCTCTTTCTGAACTTAACGGAAAGCGAGGCGAGCATATCTTCACGCTCGAAACCATTACGC
CACTGCGCACAGACCAAATGGTAGAAATCGGTCTAGAAGAAAAATCCATGCTTTTCTCCGCATTGTTAATGTATATAGTG
CAGCTTTTCACGCTATTAGTTGCAACATTGCTTTCTAGCTATATCAGTGAAAATGAACTCATCCGTGCGATTTTAATCTT
TATGTTGACCGCACTTTCCTTTGTGATGGTTAAGCGTTACACCCGAAAACTCGGCCAACAAACAGAATTTCAGTCTGTTT
TGTTAAGAGTATTGTTCTAA

Upstream 100 bases:

>100_bases
GTAAGGTGGGTATTTTTTATATGATTAAGCTCTTCAATATCAGAGACACAGAGCTTAAGTAAGAAGTCGTAACTGCCAGC
CATAAATCGATAGTGCCGTT

Downstream 100 bases:

>100_bases
ATAAAAAGAGCGGTTGAAAACAATTAAATTTTCAACCGCTCTTTTGTACTTAGCTTATTACTACTCGAAAGAGCCTACAT
TAAGATGTAGGCGTTTCTTT

Product: sigma factor regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MMSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIV
QLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQSVLLRVLF

Sequences:

>Translated_139_residues
MMSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIV
QLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQSVLLRVLF
>Mature_139_residues
MMSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQMVEIGLEEKSMLFSALLMYIV
QLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRYTRKLGQQTEFQSVLLRVLF

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family

Homologues:

Organism=Escherichia coli, GI1788923, Length=133, Percent_Identity=31.5789473684211, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y589_HAEIN (P44020)

Other databases:

- EMBL:   L42023
- PIR:   B64010
- RefSeq:   NP_438747.1
- GeneID:   949630
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0589
- NMPDR:   fig|71421.1.peg.560
- TIGR:   HI_0589
- HOGENOM:   HBG678543
- OMA:   ACSARET
- ProtClustDB:   CLSK870614
- BioCyc:   HINF71421:HI_0589-MONOMER
- InterPro:   IPR007359

Pfam domain/function: PF04246 RseC_MucC

EC number: NA

Molecular weight: Translated: 15636; Mature: 15636

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd35cee4)-; HASH(0xcacafbc)-;

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQM
CCCCCCCCCCHHEEECCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCHH
VEIGLEEKSMLFSALLMYIVQLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRY
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TRKLGQQTEFQSVLLRVLF
HHHHCCCHHHHHHHHHHHH
>Mature Secondary Structure
MMSYDAETGIAKVKCQSQSTCGACSARETCGTESLSELNGKRGEHIFTLETITPLRTDQM
CCCCCCCCCCHHEEECCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCCCCCCHH
VEIGLEEKSMLFSALLMYIVQLFTLLVATLLSSYISENELIRAILIFMLTALSFVMVKRY
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
TRKLGQQTEFQSVLLRVLF
HHHHCCCHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800