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The map label for this gene is yfcC [C]

Identifier: 16272537

GI number: 16272537

Start: 615772

End: 617301

Strand: Reverse

Name: yfcC [C]

Synonym: HI0594

Alternate gene names: 16272537

Gene position: 617301-615772 (Counterclockwise)

Preceding gene: 16272538

Following gene: 16272535

Centisome position: 33.73

GC content: 39.67

Gene sequence:

>1530_bases
ATGGATGCATCCAAAAAGAAGAAAACGTTTAATTTCCCATCAGCGTTTACCATTTTATTTGCAATATTAATTCTCGCTGT
TGGATTAACCTGGGTTATTCCATCCGGTTCATATTCAAAATTAACATATAATTCCACTGATAATGTATTTGTTGTCAAAG
CTTACGGCGTTGATGATAAAACTTATCCCGCCACAACAGACACTCTTGATAATCTCAATATCAAAATTAAACTCTCCAAC
TTCACCGAAGGCGTGATCAAAAAACCAATCGCTATTCCTGGCACCTATCAACGTGTAGAACAACACCACAAAGGCATTGA
AGACATCACCAAAAGTATGGTGGAAGGAACTATCGAAGCCGTTGATGTTATGGTCTTTATCTTCGTATTGGGGGGTATGA
TTGGTGTTATTAACCGAACCGGTTCTTTTAATGCAGGTTTGATGGCTCTCGTGAAGAAAACTAAAGGCAATGAGTTTTTT
ATTGTATTCTGCGTATCCGTCTTAATGGTGTTAGGCGGCACAACCTGTGGTATCGAAGAAGAAGCAGTGGCATTCTACCC
GATTCTGGTGCCTGTATTCTTGGCTCTGGGATATGATGCGATAGTCTGCGTAGGGGCTATATTCCTTGCTGCATCTATGG
GAACTGCATTCTCTACAATTAACCCATTCTCCGTTGTTATCGCATCAAATGCGGCTGGTATTCAATTTACTGAAGGTATT
GGTTTCCGTGCTCTAGGTTTAGTTTTAGGGGCAACTTGCGTAATCGCATATCTTTATTGGTACTGTAAAAAAATCAAAGC
TGACCCAAGTTTTTCTTATACTTACGACGATCGCGAAGAATTCCGTCAACGTTATATGAAAAACTTTGATCCGAACACAA
CTATCCCATTCTCAGCTCGTCGCAAATTAATCTTAACGCTTTTCTGTATCTCATTCCCTATTATGATTTGGGGTGTAATG
GTTGGCGGATGGTGGTTCCCTCAAATGGCTGCATCTTTCCTTGCCATTACCATCATCATTATGTTTATTAGTGGATTGTC
TGAAAAAGATATTATGGAATCTTTCACTGAAGGTGCATCAGAATTAGTAGGCGTATCCTTAATCATTGGTCTTGCTCGTG
GCGTAAACTTAGTACTCGAACAAGGTATGATTTCTGACACTATCCTTGATTATATGTCTAATGTAGTTAGTGGTATGCCG
GGTAGCGTATTCATCTTAGGCCAATTAGTCGTATTTATTTTCCTAGGTTTAATCGTACCATCTTCTTCTGGTTTAGCCGT
ACTTTCAATGCCAATTATGGCACCACTTGCTGACTCAGTGGGTATTCCACGCGATATCGTGGTTTCCGCTTACAACTGGG
GACAATATGCAATGCTATTCTTGGCGCCGACAGGATTAGTGTTAGTGACACTCCAAATGTTGCAAATTCCATTTGATAGA
TGGGTTAAATTCGTCATGCCAATGATTGGATGCTTATTGCTAATTGGTTCCATTTTATTAGTAGTACAAGTATCCTTATA
TAGCGTTTAA

Upstream 100 bases:

>100_bases
TAAAGGAACTTTGGGAAGCCATTCTCAAGGTAAAAAGTGCGGTTGGTTTAACCAATGTTTTACCAACCGCACTTTAAACG
TTAAACATAAGGAGCTCGCT

Downstream 100 bases:

>100_bases
TTAGTCAAAAATACCTATCTTAATTCTAGGCTTGGCATTAAAACCTTAAAATCAGAAGTTACTCTAAAAACGGTCAAATC
AACAACTGAATTGCCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MDASKKKKTFNFPSAFTILFAILILAVGLTWVIPSGSYSKLTYNSTDNVFVVKAYGVDDKTYPATTDTLDNLNIKIKLSN
FTEGVIKKPIAIPGTYQRVEQHHKGIEDITKSMVEGTIEAVDVMVFIFVLGGMIGVINRTGSFNAGLMALVKKTKGNEFF
IVFCVSVLMVLGGTTCGIEEEAVAFYPILVPVFLALGYDAIVCVGAIFLAASMGTAFSTINPFSVVIASNAAGIQFTEGI
GFRALGLVLGATCVIAYLYWYCKKIKADPSFSYTYDDREEFRQRYMKNFDPNTTIPFSARRKLILTLFCISFPIMIWGVM
VGGWWFPQMAASFLAITIIIMFISGLSEKDIMESFTEGASELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNVVSGMP
GSVFILGQLVVFIFLGLIVPSSSGLAVLSMPIMAPLADSVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLQIPFDR
WVKFVMPMIGCLLLIGSILLVVQVSLYSV

Sequences:

>Translated_509_residues
MDASKKKKTFNFPSAFTILFAILILAVGLTWVIPSGSYSKLTYNSTDNVFVVKAYGVDDKTYPATTDTLDNLNIKIKLSN
FTEGVIKKPIAIPGTYQRVEQHHKGIEDITKSMVEGTIEAVDVMVFIFVLGGMIGVINRTGSFNAGLMALVKKTKGNEFF
IVFCVSVLMVLGGTTCGIEEEAVAFYPILVPVFLALGYDAIVCVGAIFLAASMGTAFSTINPFSVVIASNAAGIQFTEGI
GFRALGLVLGATCVIAYLYWYCKKIKADPSFSYTYDDREEFRQRYMKNFDPNTTIPFSARRKLILTLFCISFPIMIWGVM
VGGWWFPQMAASFLAITIIIMFISGLSEKDIMESFTEGASELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNVVSGMP
GSVFILGQLVVFIFLGLIVPSSSGLAVLSMPIMAPLADSVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLQIPFDR
WVKFVMPMIGCLLLIGSILLVVQVSLYSV
>Mature_509_residues
MDASKKKKTFNFPSAFTILFAILILAVGLTWVIPSGSYSKLTYNSTDNVFVVKAYGVDDKTYPATTDTLDNLNIKIKLSN
FTEGVIKKPIAIPGTYQRVEQHHKGIEDITKSMVEGTIEAVDVMVFIFVLGGMIGVINRTGSFNAGLMALVKKTKGNEFF
IVFCVSVLMVLGGTTCGIEEEAVAFYPILVPVFLALGYDAIVCVGAIFLAASMGTAFSTINPFSVVIASNAAGIQFTEGI
GFRALGLVLGATCVIAYLYWYCKKIKADPSFSYTYDDREEFRQRYMKNFDPNTTIPFSARRKLILTLFCISFPIMIWGVM
VGGWWFPQMAASFLAITIIIMFISGLSEKDIMESFTEGASELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNVVSGMP
GSVFILGQLVVFIFLGLIVPSSSGLAVLSMPIMAPLADSVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLQIPFDR
WVKFVMPMIGCLLLIGSILLVVQVSLYSV

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycgA

Homologues:

Organism=Escherichia coli, GI87082082, Length=510, Percent_Identity=29.6078431372549, Blast_Score=221, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y594_HAEIN (P44023)

Other databases:

- EMBL:   L42023
- PIR:   E64010
- RefSeq:   NP_438751.1
- GeneID:   949632
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0594
- NMPDR:   fig|71421.1.peg.563
- TIGR:   HI_0594
- HOGENOM:   HBG377600
- OMA:   WFPQMAA
- ProtClustDB:   CLSK2518362
- BioCyc:   HINF71421:HI_0594-MONOMER
- InterPro:   IPR018387
- InterPro:   IPR018385
- PANTHER:   PTHR10283:SF43

Pfam domain/function: PF03606 DcuC

EC number: NA

Molecular weight: Translated: 55488; Mature: 55488

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcf1a3dc)-; HASH(0xd07d2b4)-; HASH(0xd3221c8)-; HASH(0xd3709b8)-; HASH(0xd2807b4)-; HASH(0xbc604e8)-; HASH(0xce1a2c0)-; HASH(0xd028eb4)-; HASH(0xd00bc5c)-; HASH(0xcf19d0c)-; HASH(0xc5ee9bc)-; HASH(0xcfab1d8)-; HASH(0xc105424)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDASKKKKTFNFPSAFTILFAILILAVGLTWVIPSGSYSKLTYNSTDNVFVVKAYGVDDK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEEEECCCCC
TYPATTDTLDNLNIKIKLSNFTEGVIKKPIAIPGTYQRVEQHHKGIEDITKSMVEGTIEA
CCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VDVMVFIFVLGGMIGVINRTGSFNAGLMALVKKTKGNEFFIVFCVSVLMVLGGTTCGIEE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCC
EAVAFYPILVPVFLALGYDAIVCVGAIFLAASMGTAFSTINPFSVVIASNAAGIQFTEGI
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCC
GFRALGLVLGATCVIAYLYWYCKKIKADPSFSYTYDDREEFRQRYMKNFDPNTTIPFSAR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
RKLILTLFCISFPIMIWGVMVGGWWFPQMAASFLAITIIIMFISGLSEKDIMESFTEGAS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNVVSGMPGSVFILGQLVVFIFLGLIVP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
SSSGLAVLSMPIMAPLADSVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLQIPFDR
CCCCCEEEEHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHH
WVKFVMPMIGCLLLIGSILLVVQVSLYSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDASKKKKTFNFPSAFTILFAILILAVGLTWVIPSGSYSKLTYNSTDNVFVVKAYGVDDK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCCCEEEEEEECCCCC
TYPATTDTLDNLNIKIKLSNFTEGVIKKPIAIPGTYQRVEQHHKGIEDITKSMVEGTIEA
CCCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
VDVMVFIFVLGGMIGVINRTGSFNAGLMALVKKTKGNEFFIVFCVSVLMVLGGTTCGIEE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCC
EAVAFYPILVPVFLALGYDAIVCVGAIFLAASMGTAFSTINPFSVVIASNAAGIQFTEGI
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEECCCCCCEEECCC
GFRALGLVLGATCVIAYLYWYCKKIKADPSFSYTYDDREEFRQRYMKNFDPNTTIPFSAR
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHH
RKLILTLFCISFPIMIWGVMVGGWWFPQMAASFLAITIIIMFISGLSEKDIMESFTEGAS
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNVVSGMPGSVFILGQLVVFIFLGLIVP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
SSSGLAVLSMPIMAPLADSVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLQIPFDR
CCCCCEEEEHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEECCHHHHHHHHHHHHCCHHH
WVKFVMPMIGCLLLIGSILLVVQVSLYSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800