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The map label for this gene is dcuD [C]

Identifier: 16272529

GI number: 16272529

Start: 607100

End: 607939

Strand: Reverse

Name: dcuD [C]

Synonym: HI0585

Alternate gene names: 16272529

Gene position: 607939-607100 (Counterclockwise)

Preceding gene: 16272530

Following gene: 16272528

Centisome position: 33.22

GC content: 40.6

Gene sequence:

>840_bases
ATGATGAGCCCAGGTTCTTCTCACTCAGCAATGATTAGTGAAATGTCAGGCTTAACTATCACTCAAGTAAACCTTTCACA
TGCACCATATAACATGATTGCGGGAGCAATAGGTGCGGTTGTTTTAACAATTCTTGCGCTTGTTTTTAAAGATTATGGTG
AACAACATCGCCAAGCTTATCTTGCAGAACAAAAAGAAAGTGAAATTAAAGTTATTGAAGGCGTCAATGTACTTTATGCC
CTTGCACCATTAATACCATTAGTTATTTTAGTGATTGGTGGAACATCATTACAACAAGTGCCAGGTCTTGAATGGACTAA
AATGGGTGTGCCTCAAGCGATGCTAATTGGTGCAATTTACGGCATTATCGTCACTCGTATTTCCCCAGTAAAAATCACAG
AAGAATTTTTCAATGGTATGGGAAATTCTTATGCAAACGTACTTGGTATTATCATTGCAGCCAGTGTATTTGTGGCAGGA
TTAAAATCTACAGGTGCAGTGGATGCTGCAATTTCTTTCTTAAAAGAATCCAACGAATTTGTACGTTGGGGTGCAACAAT
TGGACCATTCTTAATGGGCTTAATTACAGGTTCTGGCGATGCAGCAGCGATTGCCTTTAACACTGCCGTCACACCACATG
CTGTAGAACTCGGTTACACTCATGTAAATCTTGGTATGGCAGCAGCCATTGCTGGTGCAATTGGTCGTACAGCTTCACCA
ATTGCAGGTGTAACCATTGTTTGTGCAGGCCTTGCGATGGTAAGCCCAGTAGAAATGGTAAAACGTACCGCGCCAGGCAT
GATACTTGCTGTTTTATTCTTAGCATTATTTATGTTGTAA

Upstream 100 bases:

>100_bases
GTGCTGCTGCGGTTGGCGCAACATTAATTCCCGTTTTAAAAAGTGCGGGTGTTCGACCAGCTACTGCTGGGCAGCTATTT
TAGCAGGAACTTTTGGATCA

Downstream 100 bases:

>100_bases
AAATAGTAAAAAATTGACCGCACTTTATTTAAGTGCGGTCTGTTTTTATAGCCTTTTAAAGGAAGAAAAAAATGAACTTA
GATTTAAATCAACTTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MMSPGSSHSAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKESEIKVIEGVNVLYA
LAPLIPLVILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISPVKITEEFFNGMGNSYANVLGIIIAASVFVAG
LKSTGAVDAAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASP
IAGVTIVCAGLAMVSPVEMVKRTAPGMILAVLFLALFML

Sequences:

>Translated_279_residues
MMSPGSSHSAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKESEIKVIEGVNVLYA
LAPLIPLVILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISPVKITEEFFNGMGNSYANVLGIIIAASVFVAG
LKSTGAVDAAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASP
IAGVTIVCAGLAMVSPVEMVKRTAPGMILAVLFLALFML
>Mature_279_residues
MMSPGSSHSAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKESEIKVIEGVNVLYA
LAPLIPLVILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISPVKITEEFFNGMGNSYANVLGIIIAASVFVAG
LKSTGAVDAAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASP
IAGVTIVCAGLAMVSPVEMVKRTAPGMILAVLFLALFML

Specific function: Cryptic C4-dicarboxylate carrier [C]

COG id: COG3069

COG function: function code C; C4-dicarboxylate transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dcuC/dcuD transporter (TC 2.A.61) family

Homologues:

Organism=Escherichia coli, GI1789622, Length=229, Percent_Identity=31.0043668122271, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y585_HAEIN (P44018)

Other databases:

- EMBL:   L42023
- PIR:   I64009
- RefSeq:   NP_438743.1
- GeneID:   949628
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0585
- NMPDR:   fig|71421.1.peg.556
- TIGR:   HI_0585
- HOGENOM:   HBG297021
- OMA:   ATVITFF
- InterPro:   IPR018385
- InterPro:   IPR004669
- TIGRFAMs:   TIGR00771

Pfam domain/function: PF03606 DcuC

EC number: NA

Molecular weight: Translated: 28991; Mature: 28991

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcaa2bd4)-; HASH(0xc28bd90)-; HASH(0xccb8784)-; HASH(0xc352c9c)-; HASH(0xcac88c8)-; HASH(0xcc49e38)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSPGSSHSAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAY
CCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEQKESEIKVIEGVNVLYALAPLIPLVILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHH
GIIVTRISPVKITEEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAVDAAISFLKESNEF
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
VRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASP
EEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCC
IAGVTIVCAGLAMVSPVEMVKRTAPGMILAVLFLALFML
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
>Mature Secondary Structure
MMSPGSSHSAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAY
CCCCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEQKESEIKVIEGVNVLYALAPLIPLVILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHH
GIIVTRISPVKITEEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAVDAAISFLKESNEF
HHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHH
VRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASP
EEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCC
IAGVTIVCAGLAMVSPVEMVKRTAPGMILAVLFLALFML
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800