Click here to switch to the map view.

The map label for this gene is abgA

Identifier: 16272528

GI number: 16272528

Start: 605757

End: 607028

Strand: Reverse

Name: abgA

Synonym: HI0584

Alternate gene names: 16272528

Gene position: 607028-605757 (Counterclockwise)

Preceding gene: 16272529

Following gene: 16272527

Centisome position: 33.17

GC content: 37.58

Gene sequence:

>1272_bases
ATGAACTTAGATTTAAATCAACTTGTTAAATGGCATCGTGAATTTCATCGTTTTCCAGAAATTGGCTGGAGTGAATTTTG
GACAACTTCTCGCATTGCGGATTACTTGGAAGACTTAGATTGTTTTGAAATTTTTCTTGGCAAACAAATTATAAATCCAG
ACTTTGTTCGTGGACGAAAACAAGCCGTAGTAGATAAAGGTTTAGCTAATGCAAAAGCCTATGGAGCCAATGAAAAATGG
CTAGAAAAAATGGAAGGATACACTGGTTGTGTGGCATTATTTGATTCAGGTAAACCAGGAAAAACCATCGCGTTACGTTT
TGATATCGACTGTGTGAATGTAACGGAAACTCGCTCACCAGAGCATATTCCAAATAAAGAAGGTTTTGCCTCAATTAACG
ATGGTTTTATGCATGCTTGTGGACATGATTCACATATTACAATAGGTTTAGGTGTTGCATTATGGATCGCTCAGAACAAA
GATAAACTCACTGGAAAAGTAAAAATTGTATTCCAACCAGCAGAAGAAGGTGTTCGAGGTGCAGCAGCCATTGCACAAAG
TGGCATAATTGATGATGCAGATTATTTTGCTTCTTCACACATTAGTTTTTGCGCGAATACAGGCACAGTTATTGCTAATC
CAAGAAATTTTCTTTCCACTACAAAAATTGATATTCGCTATAAAGGTAAACCTGCGCACGCAGGTGCTGCGCCCCATTTA
GGTCGTAATGCTTTATTAGCTGCAGCGCATACAGTCACTCAACTTCATGGTATTGCACGCCATGGTAAAGGCATGACAAG
AATTAATGTGGGTGTGCTAAAAGCGGGTGAAGGACGAAATGTCATTCCATCCTCTGCTGAATTACAATTAGAAGTGCGGG
GAGAAAATAAAGCAATTAATGAATACATGACTGAACAAGTCATGCAAATAGCCAAAGGTATCTCCATAAGTTTTAATGTC
GCATATGAAACTGAAATTGTAGGTGAAGCCGTGGATATGAATAACGATGTTGAACTTATAAAACTCATCGAAGAAATATC
CCTTGAACAACCACAAATAAATAACGTAAATTCAGATTATGCTTTCAATGCAAGTGAAGATGCGACTATCTTAGGTAGAC
GTGTACAAGAACATGGAGGCAAAGCAATTTACTTCATTCTTGGCGCAGATCGCACAGCAGGTCATCACGAAGCTGAATTT
GATTTTGATGAAAATCAATTACTTACTGGGGTTAATATTTATACTTCCTTAGTACAGAAATTATTATCTTAA

Upstream 100 bases:

>100_bases
TTTTATTCTTAGCATTATTTATGTTGTAAAAATAGTAAAAAATTGACCGCACTTTATTTAAGTGCGGTCTGTTTTTATAG
CCTTTTAAAGGAAGAAAAAA

Downstream 100 bases:

>100_bases
TTAAATAAAAATATTTTTACTCCTTTCTTTTAAGAATCCGCTATTTTTCTTAGAATAAAGGGAATATTTACTCACCCTAA
TAAGGAAAACTCTATGATGA

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MNLDLNQLVKWHREFHRFPEIGWSEFWTTSRIADYLEDLDCFEIFLGKQIINPDFVRGRKQAVVDKGLANAKAYGANEKW
LEKMEGYTGCVALFDSGKPGKTIALRFDIDCVNVTETRSPEHIPNKEGFASINDGFMHACGHDSHITIGLGVALWIAQNK
DKLTGKVKIVFQPAEEGVRGAAAIAQSGIIDDADYFASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHL
GRNALLAAAHTVTQLHGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVRGENKAINEYMTEQVMQIAKGISISFNV
AYETEIVGEAVDMNNDVELIKLIEEISLEQPQINNVNSDYAFNASEDATILGRRVQEHGGKAIYFILGADRTAGHHEAEF
DFDENQLLTGVNIYTSLVQKLLS

Sequences:

>Translated_423_residues
MNLDLNQLVKWHREFHRFPEIGWSEFWTTSRIADYLEDLDCFEIFLGKQIINPDFVRGRKQAVVDKGLANAKAYGANEKW
LEKMEGYTGCVALFDSGKPGKTIALRFDIDCVNVTETRSPEHIPNKEGFASINDGFMHACGHDSHITIGLGVALWIAQNK
DKLTGKVKIVFQPAEEGVRGAAAIAQSGIIDDADYFASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHL
GRNALLAAAHTVTQLHGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVRGENKAINEYMTEQVMQIAKGISISFNV
AYETEIVGEAVDMNNDVELIKLIEEISLEQPQINNVNSDYAFNASEDATILGRRVQEHGGKAIYFILGADRTAGHHEAEF
DFDENQLLTGVNIYTSLVQKLLS
>Mature_423_residues
MNLDLNQLVKWHREFHRFPEIGWSEFWTTSRIADYLEDLDCFEIFLGKQIINPDFVRGRKQAVVDKGLANAKAYGANEKW
LEKMEGYTGCVALFDSGKPGKTIALRFDIDCVNVTETRSPEHIPNKEGFASINDGFMHACGHDSHITIGLGVALWIAQNK
DKLTGKVKIVFQPAEEGVRGAAAIAQSGIIDDADYFASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHL
GRNALLAAAHTVTQLHGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVRGENKAINEYMTEQVMQIAKGISISFNV
AYETEIVGEAVDMNNDVELIKLIEEISLEQPQINNVNSDYAFNASEDATILGRRVQEHGGKAIYFILGADRTAGHHEAEF
DFDENQLLTGVNIYTSLVQKLLS

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family

Homologues:

Organism=Escherichia coli, GI87081880, Length=408, Percent_Identity=40.4411764705882, Blast_Score=297, Evalue=8e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ABGA_HAEIN (P44765)

Other databases:

- EMBL:   L42023
- PIR:   B64079
- RefSeq:   NP_438742.1
- ProteinModelPortal:   P44765
- GeneID:   950603
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0584
- NMPDR:   fig|71421.1.peg.555
- TIGR:   HI_0584
- HOGENOM:   HBG708500
- OMA:   AFNASED
- ProtClustDB:   CLSK870441
- BioCyc:   HINF71421:HI_0584-MONOMER
- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650
- PIRSF:   PIRSF005962
- TIGRFAMs:   TIGR01891

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20; SSF55031 Peptidase_M20_dimer

EC number: NA

Molecular weight: Translated: 46554; Mature: 46554

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDLNQLVKWHREFHRFPEIGWSEFWTTSRIADYLEDLDCFEIFLGKQIINPDFVRGRK
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHH
QAVVDKGLANAKAYGANEKWLEKMEGYTGCVALFDSGKPGKTIALRFDIDCVNVTETRSP
HHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCC
EHIPNKEGFASINDGFMHACGHDSHITIGLGVALWIAQNKDKLTGKVKIVFQPAEEGVRG
CCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHCCHH
AAAIAQSGIIDDADYFASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHL
HHHHHHCCCCCCHHHHHHCCCEEEECCCEEEECCHHHHCEEEEEEEECCCCCCCCCCCCC
GRNALLAAAHTVTQLHGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVRGENKAIN
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHH
EYMTEQVMQIAKGISISFNVAYETEIVGEAVDMNNDVELIKLIEEISLEQPQINNVNSDY
HHHHHHHHHHHCCCEEEEEEEEEHEEHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCE
AFNASEDATILGRRVQEHGGKAIYFILGADRTAGHHEAEFDFDENQLLTGVNIYTSLVQK
EECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
LLS
HHC
>Mature Secondary Structure
MNLDLNQLVKWHREFHRFPEIGWSEFWTTSRIADYLEDLDCFEIFLGKQIINPDFVRGRK
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHCCHH
QAVVDKGLANAKAYGANEKWLEKMEGYTGCVALFDSGKPGKTIALRFDIDCVNVTETRSP
HHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCC
EHIPNKEGFASINDGFMHACGHDSHITIGLGVALWIAQNKDKLTGKVKIVFQPAEEGVRG
CCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCHHCCHH
AAAIAQSGIIDDADYFASSHISFCANTGTVIANPRNFLSTTKIDIRYKGKPAHAGAAPHL
HHHHHHCCCCCCHHHHHHCCCEEEECCCEEEECCHHHHCEEEEEEEECCCCCCCCCCCCC
GRNALLAAAHTVTQLHGIARHGKGMTRINVGVLKAGEGRNVIPSSAELQLEVRGENKAIN
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHH
EYMTEQVMQIAKGISISFNVAYETEIVGEAVDMNNDVELIKLIEEISLEQPQINNVNSDY
HHHHHHHHHHHCCCEEEEEEEEEHEEHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCE
AFNASEDATILGRRVQEHGGKAIYFILGADRTAGHHEAEFDFDENQLLTGVNIYTSLVQK
EECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHH
LLS
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800