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The map label for this gene is yebA [C]

Identifier: 16272358

GI number: 16272358

Start: 429835

End: 431262

Strand: Direct

Name: yebA [C]

Synonym: HI0409

Alternate gene names: 16272358

Gene position: 429835-431262 (Clockwise)

Preceding gene: 16272352

Following gene: 16272359

Centisome position: 23.49

GC content: 38.8

Gene sequence:

>1428_bases
ATGCCAGTGCAACACGTAAAATTAGCTCGAGATAGACGAAAAAAACGCGCATATATAAAAGTAGGCGTGTTTTTTGTTGC
TATTTTGCTTATTTTGACAGGCATTTTACTGACAATAAAAAGCAAACCTGAAGAAAACTCCATATTTTCCACCTTTGACA
GTGGGGAATATCACGAGTTAAATACATCGCCAAATGAAAATTCCACCGCACTTCAACCTGATGAAAACGCCACCTCTTAT
GATGATGAGCTACAAGCAAAAGATGACGAAGTTGATGAAGTAAAACTATCTTCAGATGATCTCGATACTTTACCTCAACA
CGCACAAGACGCACTCAATGGTTTATTAGACGCAGCCGATCAAGCCATAAGAATTACTGATCAATTTAGCTATACGGTAA
CCGAAGGGGATACGTTAAAAGATGTTTTAGTTTTGTCAGGTTTAGATGATTCATCAGTACAACCATTGATTGCGCTTGAT
CCCGAATTAGCCCACTTAAAAGCAGGTCAGCAATTTTACTGGATTTTAGATAAAAATGATAACTTGGAATATTTAAATTG
GCTGGTTTCTGAAAAAGAAGAACGTATTTATGAACGTCTCGAAGATGGGAAATTTAAACGCCAAGTTATTGAAAAGAAAA
GTATTTGGCGAAAAGAAGTATTAAAAGGCGAGATTCAAAATTCTTTAAATAGTAGTTTAAGAGAAAAAGGTCTTGATACG
CGTCAAATTAGCCAACTTAGTAACGCCTTACAATGGCAAGTGAGTTTGAGAAAACTAAAAAAAGGAACTCAATTTGCCAT
TTTAGTTTCTCGTGAATATTTAGGCGATAAACTTACTGGTCAAGGTAATGTTGAGGCGTTACGTATTTCATCTGGTGGTA
AGAATTATTATGCTGTGCAAGCTGCAAATGGTCGTTATTATAATCAGCAAGGAGAAACCTTAGGCAAAGGTTTTGCTCGT
TATCCATTGCAACGCCAAGCACGCGTATCCTCCCCTTTTAATCCAAATCGTCGTCATCCAGTAACAGGACGTATTCGTCC
GCATAAAGGTGTGGATTTCTCCGTTTCTCAAGGCACACCAGTTATTGCACCAGCAGATGGCACAGTTGAAAAAGTCGCTT
ATCAGGCTGGCGGTGCAGGACGTTATGTTATGTTACGTCACGGGCGTGAATATCAAACTGTTTATATGCATTTGAGCAAA
TCCCTAGTAAAAGCAGGGCAAACAGTTAAAAAAGGCGAACGTATTGCACTTTCTGGTAACACGGGGATTTCTACGGGGCC
GCATTTACATTATGAATTTCATATTAACGGTCGAGCAGTGAATCCTCTTACTGTTAAATTACCCGGTACTAGCAGTGGTA
TGACTTCAGCTGAACGGAAACAATTCCTTGTTCGTGTTCGTGAAGCAGAAAGAATGTTAAAACCTTAG

Upstream 100 bases:

>100_bases
TTATGTCGAATATTTAAGCGTTTGAATAATGCTTTTTCCATAGGAATGAATTTTCTTTATAATCTGTAGTCTGAATGCTG
AAAACTTTTTTATTTTAGGG

Downstream 100 bases:

>100_bases
CGATATAAAGTGCGGTCAAAAATGGTCGCATTTTTACCTTATGTAAAATAATATTTACACTTTGTTGTAAAGAAATTATC
ATAGCCATATCTTAATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MPVQHVKLARDRRKKRAYIKVGVFFVAILLILTGILLTIKSKPEENSIFSTFDSGEYHELNTSPNENSTALQPDENATSY
DDELQAKDDEVDEVKLSSDDLDTLPQHAQDALNGLLDAADQAIRITDQFSYTVTEGDTLKDVLVLSGLDDSSVQPLIALD
PELAHLKAGQQFYWILDKNDNLEYLNWLVSEKEERIYERLEDGKFKRQVIEKKSIWRKEVLKGEIQNSLNSSLREKGLDT
RQISQLSNALQWQVSLRKLKKGTQFAILVSREYLGDKLTGQGNVEALRISSGGKNYYAVQAANGRYYNQQGETLGKGFAR
YPLQRQARVSSPFNPNRRHPVTGRIRPHKGVDFSVSQGTPVIAPADGTVEKVAYQAGGAGRYVMLRHGREYQTVYMHLSK
SLVKAGQTVKKGERIALSGNTGISTGPHLHYEFHINGRAVNPLTVKLPGTSSGMTSAERKQFLVRVREAERMLKP

Sequences:

>Translated_475_residues
MPVQHVKLARDRRKKRAYIKVGVFFVAILLILTGILLTIKSKPEENSIFSTFDSGEYHELNTSPNENSTALQPDENATSY
DDELQAKDDEVDEVKLSSDDLDTLPQHAQDALNGLLDAADQAIRITDQFSYTVTEGDTLKDVLVLSGLDDSSVQPLIALD
PELAHLKAGQQFYWILDKNDNLEYLNWLVSEKEERIYERLEDGKFKRQVIEKKSIWRKEVLKGEIQNSLNSSLREKGLDT
RQISQLSNALQWQVSLRKLKKGTQFAILVSREYLGDKLTGQGNVEALRISSGGKNYYAVQAANGRYYNQQGETLGKGFAR
YPLQRQARVSSPFNPNRRHPVTGRIRPHKGVDFSVSQGTPVIAPADGTVEKVAYQAGGAGRYVMLRHGREYQTVYMHLSK
SLVKAGQTVKKGERIALSGNTGISTGPHLHYEFHINGRAVNPLTVKLPGTSSGMTSAERKQFLVRVREAERMLKP
>Mature_474_residues
PVQHVKLARDRRKKRAYIKVGVFFVAILLILTGILLTIKSKPEENSIFSTFDSGEYHELNTSPNENSTALQPDENATSYD
DELQAKDDEVDEVKLSSDDLDTLPQHAQDALNGLLDAADQAIRITDQFSYTVTEGDTLKDVLVLSGLDDSSVQPLIALDP
ELAHLKAGQQFYWILDKNDNLEYLNWLVSEKEERIYERLEDGKFKRQVIEKKSIWRKEVLKGEIQNSLNSSLREKGLDTR
QISQLSNALQWQVSLRKLKKGTQFAILVSREYLGDKLTGQGNVEALRISSGGKNYYAVQAANGRYYNQQGETLGKGFARY
PLQRQARVSSPFNPNRRHPVTGRIRPHKGVDFSVSQGTPVIAPADGTVEKVAYQAGGAGRYVMLRHGREYQTVYMHLSKS
LVKAGQTVKKGERIALSGNTGISTGPHLHYEFHINGRAVNPLTVKLPGTSSGMTSAERKQFLVRVREAERMLKP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family

Homologues:

Organism=Escherichia coli, GI87081989, Length=338, Percent_Identity=49.4082840236686, Blast_Score=330, Evalue=2e-91,
Organism=Escherichia coli, GI1789099, Length=96, Percent_Identity=38.5416666666667, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87082174, Length=112, Percent_Identity=36.6071428571429, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y409_HAEIN (P44693)

Other databases:

- EMBL:   L42023
- PIR:   F64151
- RefSeq:   NP_438571.1
- ProteinModelPortal:   P44693
- SMR:   P44693
- MEROPS:   M23.005
- GeneID:   949412
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0409
- NMPDR:   fig|71421.1.peg.384
- TIGR:   HI_0409
- HOGENOM:   HBG708607
- OMA:   GFMRFPT
- ProtClustDB:   CLSK870023
- BioCyc:   HINF71421:HI_0409-MONOMER
- GO:   GO:0006508
- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886
- PANTHER:   PTHR21666:SF7

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23; SSF51261 Dup_hybrid_motif

EC number: 3.4.24.- [C]

Molecular weight: Translated: 53256; Mature: 53125

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbf47664)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVQHVKLARDRRKKRAYIKVGVFFVAILLILTGILLTIKSKPEENSIFSTFDSGEYHEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCEEC
NTSPNENSTALQPDENATSYDDELQAKDDEVDEVKLSSDDLDTLPQHAQDALNGLLDAAD
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
QAIRITDQFSYTVTEGDTLKDVLVLSGLDDSSVQPLIALDPELAHLKAGQQFYWILDKND
CEEEEEECEEEEEECCCCHHHHHEEECCCCCCCCCEEEECCCHHHHCCCCEEEEEEECCC
NLEYLNWLVSEKEERIYERLEDGKFKRQVIEKKSIWRKEVLKGEIQNSLNSSLREKGLDT
CHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RQISQLSNALQWQVSLRKLKKGTQFAILVSREYLGDKLTGQGNVEALRISSGGKNYYAVQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCEEEEEE
AANGRYYNQQGETLGKGFARYPLQRQARVSSPFNPNRRHPVTGRIRPHKGVDFSVSQGTP
ECCCCEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCE
VIAPADGTVEKVAYQAGGAGRYVMLRHGREYQTVYMHLSKSLVKAGQTVKKGERIALSGN
EEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHCCCCEEEEECC
TGISTGPHLHYEFHINGRAVNPLTVKLPGTSSGMTSAERKQFLVRVREAERMLKP
CCCCCCCEEEEEEEECCEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
PVQHVKLARDRRKKRAYIKVGVFFVAILLILTGILLTIKSKPEENSIFSTFDSGEYHEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEECCCCCCEEC
NTSPNENSTALQPDENATSYDDELQAKDDEVDEVKLSSDDLDTLPQHAQDALNGLLDAAD
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC
QAIRITDQFSYTVTEGDTLKDVLVLSGLDDSSVQPLIALDPELAHLKAGQQFYWILDKND
CEEEEEECEEEEEECCCCHHHHHEEECCCCCCCCCEEEECCCHHHHCCCCEEEEEEECCC
NLEYLNWLVSEKEERIYERLEDGKFKRQVIEKKSIWRKEVLKGEIQNSLNSSLREKGLDT
CHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RQISQLSNALQWQVSLRKLKKGTQFAILVSREYLGDKLTGQGNVEALRISSGGKNYYAVQ
HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCEEEEEEECCCCEEEEEE
AANGRYYNQQGETLGKGFARYPLQRQARVSSPFNPNRRHPVTGRIRPHKGVDFSVSQGTP
ECCCCEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCE
VIAPADGTVEKVAYQAGGAGRYVMLRHGREYQTVYMHLSKSLVKAGQTVKKGERIALSGN
EEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHCCCCEEEEECC
TGISTGPHLHYEFHINGRAVNPLTVKLPGTSSGMTSAERKQFLVRVREAERMLKP
CCCCCCCEEEEEEEECCEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800