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The map label for this gene is 16272307

Identifier: 16272307

GI number: 16272307

Start: 383075

End: 383722

Strand: Direct

Name: 16272307

Synonym: HI0358

Alternate gene names: NA

Gene position: 383075-383722 (Clockwise)

Preceding gene: 16272306

Following gene: 16272313

Centisome position: 20.93

GC content: 42.28

Gene sequence:

>648_bases
ATGATTGAACAACTCATTCAACAAGCTCAGCCTTATTGGCAACAATATATTGAACACGAATTTGTGCAACAGCTCGCAAA
AGGTACGCTACCAAAAGCTTGTTTTCAGCATTATTTGAAGCAGGATTATCTCTATCTTTTTCATTACAGCCGAGCCTTTG
CCTTAGGTGTATTCAAGGCAAAAAATTTCGCTGAAATGGAAACACCTCGTAAAACCTTAGAGATTCTTTGCCAAGAAATT
CAACTACATTTAAATTATTGCCGTGAGTGGGGAATTAGTGAGCAAGAGATTTTTACCACCCAAGAGAGTGCCGCTTGCAT
TGCTTATACTCGCTATTTGCTTGATTGCGGCATGACGGGCAGTTTGGCTGAGCTTTATGCAGCTGTAACCCCTTGTGCTT
TGGGTTACGCTCAAGTTGCTCGTTACATTACTCAGCATTATCCTCGCTTACCGAACAATCCTTATCAAACGTGGATTGAC
ACCTATGCGAGTGAGGAATTTCAACAAGCCGCCCAAGAAACCGTTGATTTTCTTACCGCACTTTGCAAACCACTAAACCC
AAGCCAGCTTGCTGAGATTCAACAGATTTTCACCACCGCAACTAGAATGGAAATTGCGTTTTGGCAAATGGGGTTGGATT
TGGCTTAG

Upstream 100 bases:

>100_bases
ACGTTATCAACAAATGGCAGAATTTATGCAACAAAAAGGCTTAATTCCAAAAGCCTTAGCCTTGAAAGAATATGCGGTAG
AAATTGAATAAGGAAAAAAG

Downstream 100 bases:

>100_bases
GCTTAGATTGGCGATTAGACGAATAACTTTATTTATCTCCAAACGGATAAATTTATTGCGATTTTCTACCTCCTCTTTGA
GAAAAGAGGGGTAGAAAAAT

Product: transcriptional activator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI
QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTGSLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYASEEFQQAAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA

Sequences:

>Translated_215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI
QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTGSLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYASEEFQQAAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
>Mature_215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKAKNFAEMETPRKTLEILCQEI
QLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTGSLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYASEEFQQAAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=208, Percent_Identity=29.8076923076923, Blast_Score=112, Evalue=6e-26,
Organism=Saccharomyces cerevisiae, GI6325378, Length=208, Percent_Identity=28.3653846153846, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6324997, Length=208, Percent_Identity=27.8846153846154, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y358_HAEIN (P44659)

Other databases:

- EMBL:   L42023
- PIR:   D64063
- RefSeq:   NP_438520.1
- ProteinModelPortal:   P44659
- GeneID:   949463
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0358
- NMPDR:   fig|71421.1.peg.333
- TIGR:   HI_0358
- HOGENOM:   HBG317523
- OMA:   TRMEIAF
- ProtClustDB:   CLSK870424
- BioCyc:   HINF71421:HI_0358-MONOMER
- InterPro:   IPR016084
- InterPro:   IPR004305
- Gene3D:   G3DSA:1.20.910.10

Pfam domain/function: PF03070 TENA_THI-4; SSF48613 Heme_oxygenase

EC number: NA

Molecular weight: Translated: 24989; Mature: 24989

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNFAEMETPRKTLEILCQEIQLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTG
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWIDTYASEEFQQAAQETVDFLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYSRAFALGVFKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KNFAEMETPRKTLEILCQEIQLHLNYCREWGISEQEIFTTQESAACIAYTRYLLDCGMTG
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWIDTYASEEFQQAAQETVDFLTA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800