| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is yggL [C]
Identifier: 16272293
GI number: 16272293
Start: 369038
End: 369382
Strand: Direct
Name: yggL [C]
Synonym: HI0341
Alternate gene names: 16272293
Gene position: 369038-369382 (Clockwise)
Preceding gene: 16272292
Following gene: 16272295
Centisome position: 20.16
GC content: 35.07
Gene sequence:
>345_bases ATGTCTAAATCTTACAATCAACGCCAACGCAAAAAACTTCATCTCGCGGAATTTCAAGAACTGGGTTTTCTTGTAAATTT CCAATTTGCAGAAGGCACTGCGATTGAAACTGTAGATGAAACCGTTGATCGTTTTATTAACGAAGTGATTCAACCAAATG GATTAGCTTATGAAGGTAGCGGTTATTTACATTGGGAAGGTTTAGTTTGCCTAGAAAAAATTGGCAAATGCGATGAAAGC CATCGTGAAACTGTGAAAAAATGGTTAGAAACAAATGGTTTGCAACAAATTGAAGTAAGCGAATTATTTGATATTTGGTG GGAATATCCAACAAAAGTAGAATAA
Upstream 100 bases:
>100_bases TTTTGTGAAGAAATAAATCAGTTTTAGGCAAACTCGATGCCTAATTGATGAATTTAATATAGAATATGCCTTCAAATATA ACCTTAATAGGAGAAATACA
Downstream 100 bases:
>100_bases TCTAAATTGAAAACAGCATAGTCAAAATTGCTATGCTGTTTTGTTTTAATCCCTTGCAAAATTCATTAAACCTTAGATTT TTTGATCTATAACAAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSKSYNQRQRKKLHLAEFQELGFLVNFQFAEGTAIETVDETVDRFINEVIQPNGLAYEGSGYLHWEGLVCLEKIGKCDES HRETVKKWLETNGLQQIEVSELFDIWWEYPTKVE
Sequences:
>Translated_114_residues MSKSYNQRQRKKLHLAEFQELGFLVNFQFAEGTAIETVDETVDRFINEVIQPNGLAYEGSGYLHWEGLVCLEKIGKCDES HRETVKKWLETNGLQQIEVSELFDIWWEYPTKVE >Mature_113_residues SKSYNQRQRKKLHLAEFQELGFLVNFQFAEGTAIETVDETVDRFINEVIQPNGLAYEGSGYLHWEGLVCLEKIGKCDESH RETVKKWLETNGLQQIEVSELFDIWWEYPTKVE
Specific function: Unknown
COG id: COG3171
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yggL
Homologues:
Organism=Escherichia coli, GI87082190, Length=108, Percent_Identity=58.3333333333333, Blast_Score=144, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y341_HAEIN (P44649)
Other databases:
- EMBL: L42023 - PIR: G64148 - RefSeq: NP_438505.1 - GeneID: 949447 - GenomeReviews: L42023_GR - KEGG: hin:HI0341 - NMPDR: fig|71421.1.peg.320 - TIGR: HI_0341 - HOGENOM: HBG415934 - OMA: FLVNWQF - ProtClustDB: PRK11702 - BioCyc: HINF71421:HI_0341-MONOMER - InterPro: IPR007416
Pfam domain/function: PF04320 DUF469
EC number: NA
Molecular weight: Translated: 13385; Mature: 13254
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSYNQRQRKKLHLAEFQELGFLVNFQFAEGTAIETVDETVDRFINEVIQPNGLAYEGS CCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCC GYLHWEGLVCLEKIGKCDESHRETVKKWLETNGLQQIEVSELFDIWWEYPTKVE CEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKSYNQRQRKKLHLAEFQELGFLVNFQFAEGTAIETVDETVDRFINEVIQPNGLAYEGS CCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCC GYLHWEGLVCLEKIGKCDESHRETVKKWLETNGLQQIEVSELFDIWWEYPTKVE CEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023