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The map label for this gene is ssb

Identifier: 16272208

GI number: 16272208

Start: 282424

End: 282930

Strand: Direct

Name: ssb

Synonym: HI0250

Alternate gene names: 16272208

Gene position: 282424-282930 (Clockwise)

Preceding gene: 16272195

Following gene: 16272213

Centisome position: 15.43

GC content: 44.38

Gene sequence:

>507_bases
ATGGCTGGAATTAATAAAGTCATTATTGTAGGTCATTTAGGTAATGATCCTGAAATTCGTACTATGCCAAACGGCGATGC
CGTTGCAAATATCAGCGTAGCAACCAGTGAAAGCTGGAACGATCGTAATACTGGCGAACGCCGTGAAGTAACAGAATGGC
ACCGCATTGTATTCTATCGTCGTCAAGCAGAGATTTGCGGCGAATATTTACGCAAAGGCTCTCAAGTGTATGTGGAGGGG
CGTTTAAAAACGCGTAAATGGCAAGATCAAAACGGTCAAGATCGTTACACCACAGAAATTCAAGGCGATGTAATGCAAAT
GCTTGGTGGACGTAATCAAAACGCAGGTGGTTATGGTAATGATATGGGCGGTGCGCCACAATCTTCTTACCAAGCTCGTC
AAACTAACAATGGTAATAGTTATCAATCATCTCGCCCAGCTCCACAACAAGCTGCACCACAGGCTGAGCCACCAATGGAT
GGATTTGATGACGATATTCCGTTCTAA

Upstream 100 bases:

>100_bases
TTTTAATATCTGTGCAAATATCCAGTTAAAATATATAGATCTTTTAAAAAATTTCAGGCAAAATAACCGCACTTTTTTAG
ATAAAAAATGAGGTTTTTTT

Downstream 100 bases:

>100_bases
ATTACATAGATTGAAAAGTAAATGATAAAAATCAAAGAGAAGCTGAATAAAAGAGAGCTTCTCTTTTTATTTTACTAATT
AAAAGGACTAAACCTATGAT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGYGNDMGGAPQSSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMD
GFDDDIPF

Sequences:

>Translated_168_residues
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGYGNDMGGAPQSSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMD
GFDDDIPF
>Mature_167_residues
AGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEGR
LKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGYGNDMGGAPQSSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDG
FDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=184, Percent_Identity=54.3478260869565, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_HAEIN (P44409)

Other databases:

- EMBL:   L42023
- EMBL:   U04997
- PIR:   E64057
- RefSeq:   NP_438419.1
- ProteinModelPortal:   P44409
- SMR:   P44409
- GeneID:   950657
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0250
- NMPDR:   fig|71421.1.peg.235
- TIGR:   HI_0250
- HOGENOM:   HBG755544
- OMA:   RSANGER
- ProtClustDB:   PRK06863
- BioCyc:   HINF71421:HI_0250-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18754; Mature: 18623

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYR
CCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGYGN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
DMGGAPQSSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYR
CCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGYGN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
DMGGAPQSSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF
CCCCCCCCCCHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063092; 7542800