Click here to switch to the map view.

The map label for this gene is nlpI

Identifier: 16272193

GI number: 16272193

Start: 260507

End: 261451

Strand: Direct

Name: nlpI

Synonym: HI0230

Alternate gene names: 16272193

Gene position: 260507-261451 (Clockwise)

Preceding gene: 16272192

Following gene: 16272194

Centisome position: 14.23

GC content: 38.62

Gene sequence:

>945_bases
ATGCGGTGTTTTCGCTTATCTCGCCATTTTATAGTCTATTTATTTAGCTTATGTGCGATCTTACTCCTTGCTGGCTGTGT
TCAGTCTAGGGGCGGTTTTGTGTCTAAAAATCATGTCGTGTTGGCTGAACAAAACCCGAATACTCACTTTGAACAAGAAG
TGATGATCGTGCGATTAAGCCAAGTACTACTGGTTGGAAAAATGAGTAATGAAGAACGCGCATCGCTACATTTTGAACGT
GGCGTACTCTATGATTCTCTTGGATTATGGGGACTTGCTCGTTATGATCTTACTCAAGCCCTTGCATTACAGCCGAAAAT
GGCATCTGTGTACAATTACTTAGGGCTTTATTTATTGCTTGAAGAAGATTACGACGGCGCATTGGATGCTTTCAATACGG
TGTTTGAATTAGATTCAGGTTATGACTATACCCACCTTAATCGTGGTTTAAATTTTTATTATGTAGGGCGCTACCATCTT
GCTCAGCAAGATTTCTTACAGTTCTACCAAGCCGATAAAAAAGATCCCTATCGTGTCTTATGGCTATATTTGAACGAACA
AAAATTAAAACCACAAGAAGCCCAAACAAACCTTGTTGAACGAGCAAAAGGGCTATCAGAGGACTTCTGGGGTACACATA
TCGTTCAATATTACTTAGGACACATCTCTGTAGAAGAATTGCAACAACGTGCAAGTGAATTTGCCGAAAATTCACAACAA
TATGCTGAAATTCTCACAGAAACCTATTTTTATCTAGCAAAACAAAAACTCAATGTAGGGCTAGTAGATGAAGCAGCAGC
TTTATTTAAACTAGCTATGGCAAATCAGGTTTATAACTTTGTTGAGTATCGTTTTGCCGCGTTTGAACTCATGAAATTAA
AACCGGTTCAAACAGAAGACGAAAAAGAAGAGAAAAGTGCGGTAACAAAAGCGATTGTTTTCTAA

Upstream 100 bases:

>100_bases
TGTCGAAGAACAGGAATAATCTTGGAATATAGAATCAAAACTTGGTAGCATTCGCTGCCAAGTTTTGTTGTTTTCCAACT
TTTAGGCATAAAGAAAGCAA

Downstream 100 bases:

>100_bases
AAATCAATCCAAAACTTACCGCTCTTTGCAGTAGAACGAATAGAAAAATTCATTCGCTCTGCTCAACTTAATAAACCGAA
GGCCTCTTTGAGCTTTCCTT

Product: lipoprotein NlpI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLAEQNPNTHFEQEVMIVRLSQVLLVGKMSNEERASLHFER
GVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLLEEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRYHL
AQQDFLQFYQADKKDPYRVLWLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQ
YAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTEDEKEEKSAVTKAIVF

Sequences:

>Translated_314_residues
MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLAEQNPNTHFEQEVMIVRLSQVLLVGKMSNEERASLHFER
GVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLLEEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRYHL
AQQDFLQFYQADKKDPYRVLWLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQ
YAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTEDEKEEKSAVTKAIVF
>Mature_314_residues
MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLAEQNPNTHFEQEVMIVRLSQVLLVGKMSNEERASLHFER
GVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLLEEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRYHL
AQQDFLQFYQADKKDPYRVLWLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQ
YAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTEDEKEEKSAVTKAIVF

Specific function: May be involved in cell division

COG id: COG4785

COG function: function code R; Lipoprotein NlpI, contains TPR repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats

Homologues:

Organism=Escherichia coli, GI1789554, Length=292, Percent_Identity=46.2328767123288, Blast_Score=248, Evalue=5e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NLPI_HAEIN (P44585)

Other databases:

- EMBL:   L42023
- PIR:   G64145
- RefSeq:   NP_438402.1
- ProteinModelPortal:   P44585
- SMR:   P44585
- GeneID:   951148
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0230
- TIGR:   HI_0230
- HOGENOM:   HBG296981
- OMA:   LYYGGRY
- ProtClustDB:   PRK11189
- BioCyc:   HINF71421:HI_0230-MONOMER
- GO:   GO:0005488
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- Gene3D:   G3DSA:1.25.40.10

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36434; Mature: 36434

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS50005 TPR; PS50293 TPR_REGION; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLAEQNPNTHFEQEVMIVRLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHHH
QVLLVGKMSNEERASLHFERGVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLL
HHHHHHCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEE
EEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRYHLAQQDFLQFYQADKKDPYRVL
ECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEEEE
WLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQ
EEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTED
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EKEEKSAVTKAIVF
HHHHHHHHHHHHCC
>Mature Secondary Structure
MRCFRLSRHFIVYLFSLCAILLLAGCVQSRGGFVSKNHVVLAEQNPNTHFEQEVMIVRLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEECCCCCCHHHHHHHHHHH
QVLLVGKMSNEERASLHFERGVLYDSLGLWGLARYDLTQALALQPKMASVYNYLGLYLLL
HHHHHHCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEE
EEDYDGALDAFNTVFELDSGYDYTHLNRGLNFYYVGRYHLAQQDFLQFYQADKKDPYRVL
ECCCCCHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCEEEE
WLYLNEQKLKPQEAQTNLVERAKGLSEDFWGTHIVQYYLGHISVEELQQRASEFAENSQQ
EEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YAEILTETYFYLAKQKLNVGLVDEAAALFKLAMANQVYNFVEYRFAAFELMKLKPVQTED
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EKEEKSAVTKAIVF
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023