| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is 16272143
Identifier: 16272143
GI number: 16272143
Start: 190826
End: 191308
Strand: Reverse
Name: 16272143
Synonym: HI0178
Alternate gene names: NA
Gene position: 191308-190826 (Counterclockwise)
Preceding gene: 16272144
Following gene: 16272141
Centisome position: 10.45
GC content: 35.61
Gene sequence:
>483_bases ATGAAAAAAATTATTTTAACATTATCACTTGGGTTACTTACCGCTTGTTCTGCTCAAATCCAAAAGGCTGAACAAAATGA TGTGAAGCTGGCACCGCCGACTGATGTACGAAGCGGATATATACGTTTGGTAAAGAATGTGAATTATTACATCGATAGTG AATCGATCTGGGTGGATAACCAAGAGCCACAAATTGTACATTTTGATGCTGTGGTGAATTTAGATAGGGGATTGTATGTT TATCCTGAGCCTAAACGTTATGCACGTTCTGTTCGTCAGTATAAGATTTTGAATTGTGCAAATTATCATTTAACTCAAAT ACGAACTGATTTCTATGATGAATTTTGGGGACAGGGTTTGCGGGCAGCACCTAAAAAGCAAAAGAAACATACGTTAAGTT TAACACCTGATACAACGCTTTATAATGCTGCTCAGATTATTTGTGCAAATTATGGTAAAGCATTTTCAGTTGATAAAAAA TAA
Upstream 100 bases:
>100_bases CCAACTAAAGAATCCTTAGAACATATTAAAACAATCCTAGAAGGTTATGGACACACTGTAAAATTCTAGAATAAATGTCA GCTAACATAAGGAGTAAATA
Downstream 100 bases:
>100_bases AAAAATCTGCACCTTAATTAGTTTAAATTTTATTCAATTTTTAGGGTGCAGAGAGTATTCGATTTTTCTGCAGTTATTGC TATTTTACTGCTGGCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKIILTLSLGLLTACSAQIQKAEQNDVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDRGLYV YPEPKRYARSVRQYKILNCANYHLTQIRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGKAFSVDKK
Sequences:
>Translated_160_residues MKKIILTLSLGLLTACSAQIQKAEQNDVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDRGLYV YPEPKRYARSVRQYKILNCANYHLTQIRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGKAFSVDKK >Mature_160_residues MKKIILTLSLGLLTACSAQIQKAEQNDVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDNQEPQIVHFDAVVNLDRGLYV YPEPKRYARSVRQYKILNCANYHLTQIRTDFYDEFWGQGLRAAPKKQKKHTLSLTPDTTLYNAAQIICANYGKAFSVDKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y178_HAEIN (P43961)
Other databases:
- EMBL: L42023 - PIR: F64003 - RefSeq: NP_438346.1 - GeneID: 951088 - GenomeReviews: L42023_GR - KEGG: hin:HI0178 - NMPDR: fig|71421.1.peg.167 - TIGR: HI_0178 - HOGENOM: HBG495275 - OMA: IDSESIW - ProtClustDB: CLSK869936 - BioCyc: HINF71421:HI_0178-MONOMER - InterPro: IPR016595 - PIRSF: PIRSF012320
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18360; Mature: 18360
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILTLSLGLLTACSAQIQKAEQNDVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDN CCEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEECCCEEEECC QEPQIVHFDAVVNLDRGLYVYPEPKRYARSVRQYKILNCANYHLTQIRTDFYDEFWGQGL CCCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCC RAAPKKQKKHTLSLTPDTTLYNAAQIICANYGKAFSVDKK CCCCCCCCCCEEEECCCCCHHHHHHEEEECCCCEEECCCC >Mature Secondary Structure MKKIILTLSLGLLTACSAQIQKAEQNDVKLAPPTDVRSGYIRLVKNVNYYIDSESIWVDN CCEEEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCEEECCCEEEECC QEPQIVHFDAVVNLDRGLYVYPEPKRYARSVRQYKILNCANYHLTQIRTDFYDEFWGQGL CCCCEEEEEEEEECCCCEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCC RAAPKKQKKHTLSLTPDTTLYNAAQIICANYGKAFSVDKK CCCCCCCCCCEEEECCCCCHHHHHHEEEECCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800