| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is nanM [H]
Identifier: 16272115
GI number: 16272115
Start: 164623
End: 165762
Strand: Direct
Name: nanM [H]
Synonym: HI0148
Alternate gene names: 16272115
Gene position: 164623-165762 (Clockwise)
Preceding gene: 16272114
Following gene: 16272116
Centisome position: 9.0
GC content: 40.18
Gene sequence:
>1140_bases ATGGGGTTTATTATGAAACTAACTAAAACAGCATTATGTACTGCACTTTTTGCCACCTTTACTTTTTCAGCGAACGCACA AACTTATCCTGATTTGCCAGTGGGGATCAAAGGAGGAACAGGCGCATTAATTGGCGACACAGTTTATGTGGGATTAGGTT CTGGTGGCGATAAATTCTATACCTTAGACCTAAAAGATCCTTCAGCACAATGGAAAGAAATTGCTACATTTCCGGGTGGC GAACGCAATCAACCTGTTGCAGCCGCAGTGGATGGAAAACTTTATGTATTCGGTGGTTTACAAAAAAATGAAAAAGGCGA ACTTCAACTCGTTAATGACGCTTATCGCTATAACCCAAGCGATAATACTTGGATGAAACTTCCTACTCGTTCTCCCCGTG GTTTAGTAGGATCAAGTGGTGCATCTCACGGAGATAAAGTTTATATTTTAGGCGGCTCTAATCTCTCTATATTTAATGGC TTCTTCCAAGACACTGTGGCAGCAGGTGAAGATAAAGCGAAAAAAGATGAAATCGCAGCAGCTTATTTCGATCAACGTCC AGAAGATTATTTCTTTACAACAGAATTATTGAGCTATGAACCATCAACCAATAAATGGCGCAATGAAGGTCGTATTCCAT TCTCTGGTCGTGCTGGTGCAGCCTTTACAATTCAAGGTAATGAGCTAGTGGTTGTCAATGGCGAAATTAAACCTGGACTT CGCACCGCTGAAACCCATCAAGGTAAATTCACTGCTAAAGGTGTGCAATGGAAAAACTTACCTGACTTACCTGCTCCAAA AGGCAAATCACAAGATGGTTTAGCTGGTGCGCTTTCAGGCTATAGTAACGGTCATTATTTAGTCACTGGCGGCGCAAATT TTCCAGGTTCAATCAAACAATTCAAAGAAGGAAAACTTCACGCACATAAAGGTTTAAGCAAAGCTTGGCATAACGAAGTT TATACGTTGAATAATGGTAAATGGCGCATTGTTGGGGAATTACCAATGAATATTGGTTATGGTTTTTCTGTATCTTACAA CAATAAAGTTTTACTGATTGGCGGTGAAACTGATGGAGGTAAGGCTTTAACTAGCGTCAAAGCAATAAGCTATGACGGTA AAAAATTAACCATCGAATAA
Upstream 100 bases:
>100_bases ATCTGCCGTATCTTACAATACAAAAGGGTGCAATAACTGCACTTTATCAACGCCTATTCAATGCCGTTTAATGAATAGAA AACTGTAAACACAACTCAAA
Downstream 100 bases:
>100_bases TTTATCACAGAATAGTGCATAAAATTTATAATAATCAAAAGCGGCGAAATTTATCGCCGCTTTATGCAAAATAAAAGTAA TTAAAGCAAAATTAAGACAA
Product: N-acetylneuraminic acid mutarotase
Products: NA
Alternate protein names: N-acetylneuraminate mutarotase; Neu5Ac mutarotase; Sialic acid epimerase [H]
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MGFIMKLTKTALCTALFATFTFSANAQTYPDLPVGIKGGTGALIGDTVYVGLGSGGDKFYTLDLKDPSAQWKEIATFPGG ERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAYRYNPSDNTWMKLPTRSPRGLVGSSGASHGDKVYILGGSNLSIFNG FFQDTVAAGEDKAKKDEIAAAYFDQRPEDYFFTTELLSYEPSTNKWRNEGRIPFSGRAGAAFTIQGNELVVVNGEIKPGL RTAETHQGKFTAKGVQWKNLPDLPAPKGKSQDGLAGALSGYSNGHYLVTGGANFPGSIKQFKEGKLHAHKGLSKAWHNEV YTLNNGKWRIVGELPMNIGYGFSVSYNNKVLLIGGETDGGKALTSVKAISYDGKKLTIE
Sequences:
>Translated_379_residues MGFIMKLTKTALCTALFATFTFSANAQTYPDLPVGIKGGTGALIGDTVYVGLGSGGDKFYTLDLKDPSAQWKEIATFPGG ERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAYRYNPSDNTWMKLPTRSPRGLVGSSGASHGDKVYILGGSNLSIFNG FFQDTVAAGEDKAKKDEIAAAYFDQRPEDYFFTTELLSYEPSTNKWRNEGRIPFSGRAGAAFTIQGNELVVVNGEIKPGL RTAETHQGKFTAKGVQWKNLPDLPAPKGKSQDGLAGALSGYSNGHYLVTGGANFPGSIKQFKEGKLHAHKGLSKAWHNEV YTLNNGKWRIVGELPMNIGYGFSVSYNNKVLLIGGETDGGKALTSVKAISYDGKKLTIE >Mature_378_residues GFIMKLTKTALCTALFATFTFSANAQTYPDLPVGIKGGTGALIGDTVYVGLGSGGDKFYTLDLKDPSAQWKEIATFPGGE RNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAYRYNPSDNTWMKLPTRSPRGLVGSSGASHGDKVYILGGSNLSIFNGF FQDTVAAGEDKAKKDEIAAAYFDQRPEDYFFTTELLSYEPSTNKWRNEGRIPFSGRAGAAFTIQGNELVVVNGEIKPGLR TAETHQGKFTAKGVQWKNLPDLPAPKGKSQDGLAGALSGYSNGHYLVTGGANFPGSIKQFKEGKLHAHKGLSKAWHNEVY TLNNGKWRIVGELPMNIGYGFSVSYNNKVLLIGGETDGGKALTSVKAISYDGKKLTIE
Specific function: Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, whic
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 Kelch repeats [H]
Homologues:
Organism=Escherichia coli, GI87082419, Length=375, Percent_Identity=43.4666666666667, Blast_Score=320, Evalue=7e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013089 - InterPro: IPR015915 - InterPro: IPR006652 - InterPro: IPR019936 [H]
Pfam domain/function: PF01344 Kelch_1 [H]
EC number: NA
Molecular weight: Translated: 40792; Mature: 40661
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIMKLTKTALCTALFATFTFSANAQTYPDLPVGIKGGTGALIGDTVYVGLGSGGDKFY CCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEECEEEEEECCCCCEEE TLDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAYRYNPS EEEECCCCCHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECCC DNTWMKLPTRSPRGLVGSSGASHGDKVYILGGSNLSIFNGFFQDTVAAGEDKAKKDEIAA CCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCCCHHHHHH AYFDQRPEDYFFTTELLSYEPSTNKWRNEGRIPFSGRAGAAFTIQGNELVVVNGEIKPGL HHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCC RTAETHQGKFTAKGVQWKNLPDLPAPKGKSQDGLAGALSGYSNGHYLVTGGANFPGSIKQ CCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCEEHHCCCCCCCEEEECCCCCCHHHHH FKEGKLHAHKGLSKAWHNEVYTLNNGKWRIVGELPMNIGYGFSVSYNNKVLLIGGETDGG HHCCCCHHHHCHHHHHCCCEEEEECCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCC KALTSVKAISYDGKKLTIE CEEEEEEEEEECCCEEEEC >Mature Secondary Structure GFIMKLTKTALCTALFATFTFSANAQTYPDLPVGIKGGTGALIGDTVYVGLGSGGDKFY CHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEECEEEEEECCCCCEEE TLDLKDPSAQWKEIATFPGGERNQPVAAAVDGKLYVFGGLQKNEKGELQLVNDAYRYNPS EEEECCCCCHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCEEEEEEEEEECCC DNTWMKLPTRSPRGLVGSSGASHGDKVYILGGSNLSIFNGFFQDTVAAGEDKAKKDEIAA CCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHCCCCCCCHHHHHH AYFDQRPEDYFFTTELLSYEPSTNKWRNEGRIPFSGRAGAAFTIQGNELVVVNGEIKPGL HHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCC RTAETHQGKFTAKGVQWKNLPDLPAPKGKSQDGLAGALSGYSNGHYLVTGGANFPGSIKQ CCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCEEHHCCCCCCCEEEECCCCCCHHHHH FKEGKLHAHKGLSKAWHNEVYTLNNGKWRIVGELPMNIGYGFSVSYNNKVLLIGGETDGG HHCCCCHHHHCHHHHHCCCEEEEECCCEEEEEECCCCCCCEEEEECCCEEEEEECCCCCC KALTSVKAISYDGKKLTIE CEEEEEEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA