Click here to switch to the map view.

The map label for this gene is yffB [C]

Identifier: 16272077

GI number: 16272077

Start: 109846

End: 110190

Strand: Reverse

Name: yffB [C]

Synonym: HI0103

Alternate gene names: 16272077

Gene position: 110190-109846 (Counterclockwise)

Preceding gene: 16272078

Following gene: 16272076

Centisome position: 6.02

GC content: 36.81

Gene sequence:

>345_bases
ATGATTACAGTTTACGGCATTAAAAATTGCGATACAGTAAAGAAAGCGTTGAAATGGCTGGCGGATCACAATATCGAACA
CAAACTTCACGACTACCGTGTTGATGGGTTAGATTTAAATTTTTTAACCCAAGCGGAAACTCAATTTGGCTGGGATGTGT
TAGTGAATAAACGCAGTACAACTTGGCGTAATTTGGATGAGCAAGTTAAAAATTCTCTTGATAAAACCACCGCACTTTCC
GTGTTGGCTGAGAATCCAACTTTAATTAAACGCCCAATTATTTTACAAGATGGAAAGGCATTAATTGGATTTAATGAAAA
GGAATATCAGGCTGCTTTTGCTTAA

Upstream 100 bases:

>100_bases
TATCAATAAGTTGTTAGGTTAATTCATTTGAGATGAAGTAGCATAAGGGTTAAAATCCTCAGTCTGATTAGATTGAGGAT
TTTTCTTTTTTAGGTGAAAT

Downstream 100 bases:

>100_bases
AGTGCGGTTATTTTCTTAGGAGTTTTTATGAAAGAAAAAGTGGTTTCGTTGGCACAAGATTTAATTCGTCGCCCGTCTAT
TAGCCCAAATGACGAAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA

Sequences:

>Translated_114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
>Mature_114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family

Homologues:

Organism=Escherichia coli, GI1788815, Length=115, Percent_Identity=48.695652173913, Blast_Score=124, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y103_HAEIN (P44515)

Other databases:

- EMBL:   L42023
- PIR:   F64142
- RefSeq:   NP_438277.1
- ProteinModelPortal:   P44515
- SMR:   P44515
- GeneID:   951002
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0103
- NMPDR:   fig|71421.1.peg.100
- TIGR:   HI_0103
- HOGENOM:   HBG734370
- OMA:   FGIKNCD
- ProtClustDB:   CLSK870339
- BioCyc:   HINF71421:HI_0103-MONOMER
- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504
- Gene3D:   G3DSA:3.40.30.10
- TIGRFAMs:   TIGR01617

Pfam domain/function: PF03960 ArsC; SSF52833 Thiordxn-like_fd

EC number: NA

Molecular weight: Translated: 13060; Mature: 13060

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS51353 ARSC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFGWDVLVNKRST
CEEEEECCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCEEEEECCCCCCCEEEEEECCCC
TWRNLDEQVKNSLDKTTALSVLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECCCCHHHHCCCC
>Mature Secondary Structure
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAETQFGWDVLVNKRST
CEEEEECCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCEEEEECCCCCCCEEEEEECCCC
TWRNLDEQVKNSLDKTTALSVLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023