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The map label for this gene is yifN [C]

Identifier: 16272054

GI number: 16272054

Start: 86575

End: 87006

Strand: Direct

Name: yifN [C]

Synonym: HI0080

Alternate gene names: 16272054

Gene position: 86575-87006 (Clockwise)

Preceding gene: 16272053

Following gene: 16272055

Centisome position: 4.73

GC content: 31.94

Gene sequence:

>432_bases
ATGAGCATAAAACAACATCGCCCTAAAGTTGGAGAAATTCTAGAATGTGATTATGGTCAATTTTCGCATACCTGTCACGT
TGATGGACATATTCCACCTGAAATGGTTAAAAAACGTTTGGTTGTTGTTTTGAATGCTAAACTGAATGGGCTTATTTTAG
TTGCACCAATTTCATCTAAAATTAATTTAGATGGTATAAAAAATGGCTATCATATTGAAATAGATTCAGAATTAATAAAA
GCAACAGGCTTTTATGATAAAAGGACTCGCTGGATTAAATCTGAATTAATTCAATCAGTAAGTCGTCTCCGTCTGTATCA
TATTTATGATAAAGGAACTAAAATTACTCAATATTTGCCAAGGGATGTTGTAACAAAAGTTCAAAGAGCTATCATAAAAG
CAATCAATGCAAGCTCATTACTTGACAAGTAG

Upstream 100 bases:

>100_bases
TGTGGATAAAATCAAAAAAGTGAAAACAGGCAACAAAGGCTTTCATCAAGATGTTCCAACTGAAGATGTAGTGATTACAT
CGGTTTCTATTGAGTAACAA

Downstream 100 bases:

>100_bases
ATAGAATACAGTATAGACTTCCGAGCGTAACGCCTTAGAGCGATCATCATCGAAAGATGAGTTTTTAAACGCCATTGAGC
GATGAATCCCCTGATTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSIKQHRPKVGEILECDYGQFSHTCHVDGHIPPEMVKKRLVVVLNAKLNGLILVAPISSKINLDGIKNGYHIEIDSELIK
ATGFYDKRTRWIKSELIQSVSRLRLYHIYDKGTKITQYLPRDVVTKVQRAIIKAINASSLLDK

Sequences:

>Translated_143_residues
MSIKQHRPKVGEILECDYGQFSHTCHVDGHIPPEMVKKRLVVVLNAKLNGLILVAPISSKINLDGIKNGYHIEIDSELIK
ATGFYDKRTRWIKSELIQSVSRLRLYHIYDKGTKITQYLPRDVVTKVQRAIIKAINASSLLDK
>Mature_142_residues
SIKQHRPKVGEILECDYGQFSHTCHVDGHIPPEMVKKRLVVVLNAKLNGLILVAPISSKINLDGIKNGYHIEIDSELIKA
TGFYDKRTRWIKSELIQSVSRLRLYHIYDKGTKITQYLPRDVVTKVQRAIIKAINASSLLDK

Specific function: Unknown

COG id: COG3692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yifN

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y080_HAEIN (P43936)

Other databases:

- EMBL:   L42023
- PIR:   H64000
- RefSeq:   NP_438253.1
- ProteinModelPortal:   P43936
- GeneID:   950976
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0080
- NMPDR:   fig|71421.1.peg.79
- TIGR:   HI_0080
- HOGENOM:   HBG467425
- OMA:   QFSTTYY
- ProtClustDB:   CLSK880779
- BioCyc:   HINF71421:HI_0080-MONOMER
- InterPro:   IPR003477
- InterPro:   IPR011067
- Gene3D:   G3DSA:2.30.30.110

Pfam domain/function: PF02452 PemK; SSF50118 Plasmid_toxin

EC number: NA

Molecular weight: Translated: 16292; Mature: 16161

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKQHRPKVGEILECDYGQFSHTCHVDGHIPPEMVKKRLVVVLNAKLNGLILVAPISSK
CCCCCCCCCCCCEEECCCCCCCCEEEECCCCCHHHHHHHEEEEEECCCCCEEEEEECCCC
INLDGIKNGYHIEIDSELIKATGFYDKRTRWIKSELIQSVSRLRLYHIYDKGTKITQYLP
EECCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCC
RDVVTKVQRAIIKAINASSLLDK
HHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure 
SIKQHRPKVGEILECDYGQFSHTCHVDGHIPPEMVKKRLVVVLNAKLNGLILVAPISSK
CCCCCCCCCCCEEECCCCCCCCEEEECCCCCHHHHHHHEEEEEECCCCCEEEEEECCCC
INLDGIKNGYHIEIDSELIKATGFYDKRTRWIKSELIQSVSRLRLYHIYDKGTKITQYLP
EECCCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHCC
RDVVTKVQRAIIKAINASSLLDK
HHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800