Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082759

Identifier: 99082759

GI number: 99082759

Start: 3088950

End: 3090503

Strand: Direct

Name: 99082759

Synonym: TM1040_2919

Alternate gene names: NA

Gene position: 3088950-3090503 (Clockwise)

Preceding gene: 99082758

Following gene: 99082766

Centisome position: 96.5

GC content: 60.55

Gene sequence:

>1554_bases
ATGAGCTATTACCGTGCGGCGGTCTGCGCCGCACTCTGCTTTTTCAGCTTTGGCCAACCGGTTCTGGGACAGGATGTAAC
GCTGTCCTCGCCCGATGGCGCCATCGAGGTGAGTGGAGATCTGCTGGGTTTTGATGGTGAGTTCTACCGTGTGGAGACGC
AGTTTGGCGAGCTGACCGTGGATGGCTCCGGGGTGCGCTGTGAGGGTCCGGGCTGCCCTAGCCTGTCTGACTTCGTTGCC
GAGATCACCTTTGCCGGGTCCTCCACCATGGCAGAGGTTCTCCTGCCCGCGCTGATCGAGGGTTTCTCTCTGCGCAACGG
ATATCAGACCGCCCGCATGCAACTGGATTCGCGTCAGTTTGAATACACGCTGTCACGCGACGGCCGGGTTGCGGGGCGGT
TCACCTTTCAAGTCAGCAATACGGATGAAGGCTTTGCAGATGTCCTGGCCAACCAGGCCGACATCGTGATGGCATTGCGT
GAAATCCGGGAAGCCGAGCACCTATTGGCGTCCGAGGCAGGTCTTGGCGATATGTCTTTGTCCAATCGGGGGCGGGTGCT
GGCCCTGGATGCCATGGTGCCTGTTGTGGCACCGTCGAATCCGGTGCGACGGATCTCGCTGCCTCAACTTGCGGATATTT
ACGCGGGCAAGATCACCAATTGGTCCGAGCTTGGCGGCGCTGACGCACCCATTTCGGTGCATTTGCCCGTTGCTGGGGCA
GGGTTGGCGCAGGCTGTCGAGGACAAGCTCTTGTCACCTGCCGGGCTCGAACTCTCCGAGAGTATTCGCCGCCATGATCG
CGGCAGCACGCTTGTGCGGACGGTCGCCACCGACCCGTTTGCGATTGGCATCGCGAGCTATGCCGAAACTGGCCAGACCC
GGATGCTCACGCTTACGGGGGCTTGTGGGTTTTCGCTGTCAGCGGGACGGCGCAGTATCAAGACCGAGGACTACCCTCTG
ACTGCGCCGATGTTTCTCTATCTGCCTGCCCACCGCCTGCCACGCATTGCCCGGGACTTTTTGACCTATGTGCGTGGCCC
TGCTGCCCAGATCGTGATCCGTCGCGCAGGGTTTGTGGATCAGGCACCGGAGCATATCCCGCTGCGTCTTCAGGGGGAAC
GGCTCAGCAATGCGATACGATCTGCAGGGGAAGACATCCCGCTCAGCGAGCTGCAACGATTGATTTCGGGGCTCGATGGA
TTGCAGCGATTGACCACCTCATTTCGATTTGAGGCCGGATCGTCCAGGCCTGATGCGCAATCCCGCAACAATATCGATTT
GCTCGCGCGTGAACTTGAAGCCGGAGTCTACGACGGTAAGCGCTTGGTTTTTGTGGGATTCTCAGACGGTGAGGGGCCAG
CGGAGGGCAACCGTGCCATCGCGATGAAGCGCGCGGAGTCGGTGCGCCGCGCCGTGGAGCGCGCAGCCGAAACCGCAAAT
CTGGATCGCATTTCGATCGAGACAGCGGCTTACGGCGAAGCACTTCCCATTGCCTGCGATGACAGTGCCTGGGGTCGACA
AGCCAACCGGCGTGTCGAAGTCTGGATCAGGTAA

Upstream 100 bases:

>100_bases
TCCCCGATTGTTCGGCGGTTGGTGATTTTCTGGTGTTGAATAATCTCGTCGAAAGCCTGAAAATCGCCTCCAACTAACTG
GGGCGACACCGGGATTTCTC

Downstream 100 bases:

>100_bases
GCCTACGCGCTTTGCGTTTCATGACGATCTGTCCAACGGAGGCAGTATCGTTTGTCTGCGGCCAGGTCTGCGATTCAGCG
TAACCACATGCGCTGTATCT

Product: OmpA/MotB

Products: NA

Alternate protein names: OmpA/MotB; OmpA/MotB Domain-Containing Protein; OmpA Domain Protein; Phosphate ABC Transporter; OmpA/MotB Domain Protein; Phosphate-Related ABC Transporter Exported Protein; Phosphate ABC Transporter Periplasmic Protein; OmpA Domain-Containing Protein; Serine/Threonine Protein Kinase; NB Family Protein; PstS ABC-Type Phosphate Transport System Protein

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGFDGEFYRVETQFGELTVDGSGVRCEGPGCPSLSDFVA
EITFAGSSTMAEVLLPALIEGFSLRNGYQTARMQLDSRQFEYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALR
EIREAEHLLASEAGLGDMSLSNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKITNWSELGGADAPISVHLPVAGA
GLAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVATDPFAIGIASYAETGQTRMLTLTGACGFSLSAGRRSIKTEDYPL
TAPMFLYLPAHRLPRIARDFLTYVRGPAAQIVIRRAGFVDQAPEHIPLRLQGERLSNAIRSAGEDIPLSELQRLISGLDG
LQRLTTSFRFEAGSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETAN
LDRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR

Sequences:

>Translated_517_residues
MSYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGFDGEFYRVETQFGELTVDGSGVRCEGPGCPSLSDFVA
EITFAGSSTMAEVLLPALIEGFSLRNGYQTARMQLDSRQFEYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALR
EIREAEHLLASEAGLGDMSLSNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKITNWSELGGADAPISVHLPVAGA
GLAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVATDPFAIGIASYAETGQTRMLTLTGACGFSLSAGRRSIKTEDYPL
TAPMFLYLPAHRLPRIARDFLTYVRGPAAQIVIRRAGFVDQAPEHIPLRLQGERLSNAIRSAGEDIPLSELQRLISGLDG
LQRLTTSFRFEAGSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETAN
LDRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR
>Mature_516_residues
SYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGFDGEFYRVETQFGELTVDGSGVRCEGPGCPSLSDFVAE
ITFAGSSTMAEVLLPALIEGFSLRNGYQTARMQLDSRQFEYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALRE
IREAEHLLASEAGLGDMSLSNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKITNWSELGGADAPISVHLPVAGAG
LAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVATDPFAIGIASYAETGQTRMLTLTGACGFSLSAGRRSIKTEDYPLT
APMFLYLPAHRLPRIARDFLTYVRGPAAQIVIRRAGFVDQAPEHIPLRLQGERLSNAIRSAGEDIPLSELQRLISGLDGL
QRLTTSFRFEAGSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETANL
DRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR

Specific function: Unknown

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55855; Mature: 55724

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGFDGEFYRVETQFGELTV
CCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCEEECCCCEEEEEEECCEEEE
DGSGVRCEGPGCPSLSDFVAEITFAGSSTMAEVLLPALIEGFSLRNGYQTARMQLDSRQF
CCCCEEECCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEE
EYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALREIREAEHLLASEAGLGDMSL
EEEECCCCEEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKITNWSELGGADAPISVHLPVAGA
CCCCCEEEEECEEEEECCCCCCEECCCCHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCC
GLAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVATDPFAIGIASYAETGQTRMLTLTG
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHCCCCEEEEEEEC
ACGFSLSAGRRSIKTEDYPLTAPMFLYLPAHRLPRIARDFLTYVRGPAAQIVIRRAGFVD
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
QAPEHIPLRLQGERLSNAIRSAGEDIPLSELQRLISGLDGLQRLTTSFRFEAGSSRPDAQ
CCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
SRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETAN
CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCC
LDRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR
CCEEEEEHHCCCCCCEEEECCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
SYYRAAVCAALCFFSFGQPVLGQDVTLSSPDGAIEVSGDLLGFDGEFYRVETQFGELTV
CHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCEEECCCCEEEEEEECCEEEE
DGSGVRCEGPGCPSLSDFVAEITFAGSSTMAEVLLPALIEGFSLRNGYQTARMQLDSRQF
CCCCEEECCCCCCCHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCEE
EYTLSRDGRVAGRFTFQVSNTDEGFADVLANQADIVMALREIREAEHLLASEAGLGDMSL
EEEECCCCEEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SNRGRVLALDAMVPVVAPSNPVRRISLPQLADIYAGKITNWSELGGADAPISVHLPVAGA
CCCCCEEEEECEEEEECCCCCCEECCCCHHHHHHHCCCCCHHHCCCCCCCEEEEECCCCC
GLAQAVEDKLLSPAGLELSESIRRHDRGSTLVRTVATDPFAIGIASYAETGQTRMLTLTG
HHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHHCCCCEEEEEEEC
ACGFSLSAGRRSIKTEDYPLTAPMFLYLPAHRLPRIARDFLTYVRGPAAQIVIRRAGFVD
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
QAPEHIPLRLQGERLSNAIRSAGEDIPLSELQRLISGLDGLQRLTTSFRFEAGSSRPDAQ
CCCCCCCEEEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
SRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAVERAAETAN
CCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCC
LDRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR
CCEEEEEHHCCCCCCEEEECCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA