Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082608

Identifier: 99082608

GI number: 99082608

Start: 2916264

End: 2917172

Strand: Direct

Name: 99082608

Synonym: TM1040_2768

Alternate gene names: NA

Gene position: 2916264-2917172 (Clockwise)

Preceding gene: 99082607

Following gene: 99082609

Centisome position: 91.11

GC content: 64.47

Gene sequence:

>909_bases
GTGAGCCTGCCCCTCGCCTCTCCCGACAGGACGGCGCGCGGCCCCGCAGGCCAGATCCGCAGCCGCGCCGAAGAGGCCGC
CAGTGTCCTGCCGCCGCTGTTGGTGCAGGCCCAACAACTCGCCGGGGCGGTCTTGCTCGGCGAACACGGCCGCAGGCGCT
CTGGGGTGGGCGATGATTTCTGGCAATATCGCCCCGTGCAGCAAGGCGATAGCCGTCGCATGATCGACCATCGCCGCTCC
GCGCGTGGCGATCAGCAATTTGTCCGCGAGCGGGAATGGCAGATTGCCCAGACTGTCCATCTCTGGGTGGACCAGGGACA
GTCCATGCGCTTTGCCTCAGATGGAAAACTGCCCCAAAAGATCGACCGCGCGCGCCTGCTGGCCCTAGCGTCTGCAGTGC
TGATGGTGCGCGGTGGCGAACGTGTCGGGCTCACAGGTGGGCTGTTGCCGCCACGGCGCGGAAACATGCAAATCCTGCGA
TTGGCCGAGCATTTTACCACTCAGGACGACGCCACATATGCGCCACCCGAACATCGGGCCCTCATTCCGCATGCGCGGGC
CTTGTTCATCTCTGACTTCCTCGGACCCTTTGAGGAGCTCGAGATCGCGCTGAGCAAAGCCGCAGATCGCGGCCTTCGAG
GGGTGCTGTTGCAGGTGCTTGATCCAAGCGAAGAGCTGTTTCCCTTTGCAGGGCGCACCCGGTTCGAGGGACCGCACAAA
GCGCATGTTCACGAAACACTCAAAGCATCTGCCCTGCGGGACCGGTATCTTGAGCGTCTCGCGCAACGGCGCGATGCACT
CGAAACACTCTGCCGCGCGGCAGGCTGGACGCTTGGGCTGCATCACACCGGCGACAGCGCCCAATCGGGGCTGCTGTGGC
TCTATCACGCATTGGAGCGGCGGCAATGA

Upstream 100 bases:

>100_bases
ACCGCATGCAACTCAACTTTGCCGCGCGCGCCCGCGGCGACAGCCTTGCCGAGCTGATCGACGAAACCGCCGCCTCCCTC
GTCAAAGCCGAGGCCGCCGC

Downstream 100 bases:

>100_bases
CGATGATCGCGGGCATAGGTTTTGCAAGCCCCTGGCTTCTGCTTGGGCTCTTGGTGTTGCCGATCCTGTGGCTTTTGCTG
CGTGCAATCCCGCCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAVLLGEHGRRRSGVGDDFWQYRPVQQGDSRRMIDHRRS
ARGDQQFVREREWQIAQTVHLWVDQGQSMRFASDGKLPQKIDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILR
LAEHFTTQDDATYAPPEHRALIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQVLDPSEELFPFAGRTRFEGPHK
AHVHETLKASALRDRYLERLAQRRDALETLCRAAGWTLGLHHTGDSAQSGLLWLYHALERRQ

Sequences:

>Translated_302_residues
MSLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAVLLGEHGRRRSGVGDDFWQYRPVQQGDSRRMIDHRRS
ARGDQQFVREREWQIAQTVHLWVDQGQSMRFASDGKLPQKIDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILR
LAEHFTTQDDATYAPPEHRALIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQVLDPSEELFPFAGRTRFEGPHK
AHVHETLKASALRDRYLERLAQRRDALETLCRAAGWTLGLHHTGDSAQSGLLWLYHALERRQ
>Mature_301_residues
SLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAVLLGEHGRRRSGVGDDFWQYRPVQQGDSRRMIDHRRSA
RGDQQFVREREWQIAQTVHLWVDQGQSMRFASDGKLPQKIDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILRL
AEHFTTQDDATYAPPEHRALIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQVLDPSEELFPFAGRTRFEGPHKA
HVHETLKASALRDRYLERLAQRRDALETLCRAAGWTLGLHHTGDSAQSGLLWLYHALERRQ

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33819; Mature: 33688

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAVLLGEHGRRRSGVGDDF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHH
WQYRPVQQGDSRRMIDHRRSARGDQQFVREREWQIAQTVHLWVDQGQSMRFASDGKLPQK
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHH
IDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILRLAEHFTTQDDATYAPPEHRA
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCE
LIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQVLDPSEELFPFAGRTRFEGPHK
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCH
AHVHETLKASALRDRYLERLAQRRDALETLCRAAGWTLGLHHTGDSAQSGLLWLYHALER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
RQ
CC
>Mature Secondary Structure 
SLPLASPDRTARGPAGQIRSRAEEAASVLPPLLVQAQQLAGAVLLGEHGRRRSGVGDDF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCHH
WQYRPVQQGDSRRMIDHRRSARGDQQFVREREWQIAQTVHLWVDQGQSMRFASDGKLPQK
HHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHH
IDRARLLALASAVLMVRGGERVGLTGGLLPPRRGNMQILRLAEHFTTQDDATYAPPEHRA
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCE
LIPHARALFISDFLGPFEELEIALSKAADRGLRGVLLQVLDPSEELFPFAGRTRFEGPHK
ECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCH
AHVHETLKASALRDRYLERLAQRRDALETLCRAAGWTLGLHHTGDSAQSGLLWLYHALER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH
RQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA