| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yeaC [H]
Identifier: 99082607
GI number: 99082607
Start: 2915260
End: 2916267
Strand: Direct
Name: yeaC [H]
Synonym: TM1040_2767
Alternate gene names: 99082607
Gene position: 2915260-2916267 (Clockwise)
Preceding gene: 99082604
Following gene: 99082608
Centisome position: 91.08
GC content: 63.19
Gene sequence:
>1008_bases ATGAGCGAAGCACAGGATCTATTGACCGACATCGAAGCGCTGGAGGTTCGCCTGCAAGACGCGCGCGCCTCGATCAAACG TCGCTTCATCGGACAGGAGCGGGTCGTGGACCTGACTCTGGCGACCCTCTTGTGCGGAGGCCATGGGCTTTTGATCGGCC TACCCGGCCTTGGCAAAACCCGACTGGTCGAAGCGCTTTCGACCGTTATGGGCCTCAATGGAAACCGGGTGCAATTCACG CCGGACCTGATGCCCGCCGACATCCTTGGCTCCGAAGTTCTTGATACAGCCCCTGATGGCACCCGCGCCTTTCGCTTCGT ACAGGGACCAATTTTTTGTCAGCTGCTGATGGCGGATGAAATAAACCGCGCCTCACCCCGGACCCAGTCGGCGCTCCTAC AGGCGATGCAAGAGAAAACCGTGACCGTCGCGGGCGCCGACCGGGCGTTGGATGCACCGTTTCATGTGCTTGCGACGCAA AACCCGATCGAGCAGGAAGGCACCTATCCGCTGCCTGAGGCACAGCTCGACCGGTTCCTCATGCAGATCGACATCCACTA CCCCGACCGCGAAACCGAGCGCGATATTCTCATCGCGACCACGGGTGTCGAAGAGGAAGCCGCGCATCAGGTCTTTACCG CCGAGGAATTAATCGCGGCCCAAACCCTCTTGCGCCGCATGCCAGTGGGCGAATCCGTGGTCGAAGTGATCCTTGACCTT GTGCGCGCCTTCCGTCCCGAAGACCCTGCTGCAAGTGAGCGCGTGGCGCAGACCGTGGCCTGGGGGCCCGGACCACGGGC GGCACAGGCGCTGATGCTGGCGGTGCGGGCACGCGCCTTGTTGCAAGGCCGACTGGCCCCCAATACCGAAGACGTCATCG ACATGGCGCGCCCGATCCTGAGCCACCGCATGCAACTCAACTTTGCCGCGCGCGCCCGCGGCGACAGCCTTGCCGAGCTG ATCGACGAAACCGCCGCCTCCCTCGTCAAAGCCGAGGCCGCCGCGTGA
Upstream 100 bases:
>100_bases ATCCGCATCCGGTTTCACAACTTTTTGTCCGCTCATTCGTTTTGCCATTCCATTCCCGCGCGATACACTCAAACCATATA AGCCCACAGAAAGGGAAGTC
Downstream 100 bases:
>100_bases GCCTGCCCCTCGCCTCTCCCGACAGGACGGCGCGCGGCCCCGCAGGCCAGATCCGCAGCCGCGCCGAAGAGGCCGCCAGT GTCCTGCCGCCGCTGTTGGT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFT PDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQ NPIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAEL IDETAASLVKAEAAA
Sequences:
>Translated_335_residues MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFT PDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQ NPIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAEL IDETAASLVKAEAAA >Mature_334_residues SEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFTP DLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQN PIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDLV RAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAELI DETAASLVKAEAAA
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 36437; Mature: 36306
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH RLVEALSTVMGLNGNRVQFTPDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADE HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH INRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQNPIEQEGTYPLPEAQLDRFL CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH MQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL HHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPIL HHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SHRMQLNFAARARGDSLAELIDETAASLVKAEAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH RLVEALSTVMGLNGNRVQFTPDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADE HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH INRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQNPIEQEGTYPLPEAQLDRFL CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH MQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL HHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPIL HHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SHRMQLNFAARARGDSLAELIDETAASLVKAEAAA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]