Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is yeaC [H]

Identifier: 99082607

GI number: 99082607

Start: 2915260

End: 2916267

Strand: Direct

Name: yeaC [H]

Synonym: TM1040_2767

Alternate gene names: 99082607

Gene position: 2915260-2916267 (Clockwise)

Preceding gene: 99082604

Following gene: 99082608

Centisome position: 91.08

GC content: 63.19

Gene sequence:

>1008_bases
ATGAGCGAAGCACAGGATCTATTGACCGACATCGAAGCGCTGGAGGTTCGCCTGCAAGACGCGCGCGCCTCGATCAAACG
TCGCTTCATCGGACAGGAGCGGGTCGTGGACCTGACTCTGGCGACCCTCTTGTGCGGAGGCCATGGGCTTTTGATCGGCC
TACCCGGCCTTGGCAAAACCCGACTGGTCGAAGCGCTTTCGACCGTTATGGGCCTCAATGGAAACCGGGTGCAATTCACG
CCGGACCTGATGCCCGCCGACATCCTTGGCTCCGAAGTTCTTGATACAGCCCCTGATGGCACCCGCGCCTTTCGCTTCGT
ACAGGGACCAATTTTTTGTCAGCTGCTGATGGCGGATGAAATAAACCGCGCCTCACCCCGGACCCAGTCGGCGCTCCTAC
AGGCGATGCAAGAGAAAACCGTGACCGTCGCGGGCGCCGACCGGGCGTTGGATGCACCGTTTCATGTGCTTGCGACGCAA
AACCCGATCGAGCAGGAAGGCACCTATCCGCTGCCTGAGGCACAGCTCGACCGGTTCCTCATGCAGATCGACATCCACTA
CCCCGACCGCGAAACCGAGCGCGATATTCTCATCGCGACCACGGGTGTCGAAGAGGAAGCCGCGCATCAGGTCTTTACCG
CCGAGGAATTAATCGCGGCCCAAACCCTCTTGCGCCGCATGCCAGTGGGCGAATCCGTGGTCGAAGTGATCCTTGACCTT
GTGCGCGCCTTCCGTCCCGAAGACCCTGCTGCAAGTGAGCGCGTGGCGCAGACCGTGGCCTGGGGGCCCGGACCACGGGC
GGCACAGGCGCTGATGCTGGCGGTGCGGGCACGCGCCTTGTTGCAAGGCCGACTGGCCCCCAATACCGAAGACGTCATCG
ACATGGCGCGCCCGATCCTGAGCCACCGCATGCAACTCAACTTTGCCGCGCGCGCCCGCGGCGACAGCCTTGCCGAGCTG
ATCGACGAAACCGCCGCCTCCCTCGTCAAAGCCGAGGCCGCCGCGTGA

Upstream 100 bases:

>100_bases
ATCCGCATCCGGTTTCACAACTTTTTGTCCGCTCATTCGTTTTGCCATTCCATTCCCGCGCGATACACTCAAACCATATA
AGCCCACAGAAAGGGAAGTC

Downstream 100 bases:

>100_bases
GCCTGCCCCTCGCCTCTCCCGACAGGACGGCGCGCGGCCCCGCAGGCCAGATCCGCAGCCGCGCCGAAGAGGCCGCCAGT
GTCCTGCCGCCGCTGTTGGT

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFT
PDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQ
NPIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL
VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAEL
IDETAASLVKAEAAA

Sequences:

>Translated_335_residues
MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFT
PDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQ
NPIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL
VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAEL
IDETAASLVKAEAAA
>Mature_334_residues
SEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKTRLVEALSTVMGLNGNRVQFTP
DLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADEINRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQN
PIEQEGTYPLPEAQLDRFLMQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDLV
RAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPILSHRMQLNFAARARGDSLAELI
DETAASLVKAEAAA

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moxR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011703
- InterPro:   IPR016366 [H]

Pfam domain/function: PF07726 AAA_3 [H]

EC number: NA

Molecular weight: Translated: 36437; Mature: 36306

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH
RLVEALSTVMGLNGNRVQFTPDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADE
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH
INRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQNPIEQEGTYPLPEAQLDRFL
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
MQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL
HHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPIL
HHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SHRMQLNFAARARGDSLAELIDETAASLVKAEAAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEAQDLLTDIEALEVRLQDARASIKRRFIGQERVVDLTLATLLCGGHGLLIGLPGLGKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCCHH
RLVEALSTVMGLNGNRVQFTPDLMPADILGSEVLDTAPDGTRAFRFVQGPIFCQLLMADE
HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHH
INRASPRTQSALLQAMQEKTVTVAGADRALDAPFHVLATQNPIEQEGTYPLPEAQLDRFL
CCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
MQIDIHYPDRETERDILIATTGVEEEAAHQVFTAEELIAAQTLLRRMPVGESVVEVILDL
HHEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VRAFRPEDPAASERVAQTVAWGPGPRAAQALMLAVRARALLQGRLAPNTEDVIDMARPIL
HHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
SHRMQLNFAARARGDSLAELIDETAASLVKAEAAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]