| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yafP [C]
Identifier: 99082599
GI number: 99082599
Start: 2907826
End: 2908299
Strand: Reverse
Name: yafP [C]
Synonym: TM1040_2759
Alternate gene names: 99082599
Gene position: 2908299-2907826 (Counterclockwise)
Preceding gene: 99082600
Following gene: 99082597
Centisome position: 90.86
GC content: 62.24
Gene sequence:
>474_bases ATGCTGATGCAGATCCGTCCGTTTGAACCCCGTGATGCTGTCGATTGGGCCCGCATTTTTCACACCGCTGTGCATGAGGT GGGCGCGCGCGACTACACCCCGGAACAATGCGCTGCCTGGAGCCCGGAACCTGCCCCCGTTGACCGCGTGCTGGAACGTG CGCAAGACGGGCGCCGCATTTGGGTTGCTGCCGATACACAAGATGTGGCGCAAGGGTTTATCGAGCTCGAACCCGACGGG CATATCGACTGCTTCTATCTTGCGCCTGACGTTGCCGGTGCGGGCATTGGTGCGTCGCTTTATGCGCGACTGGAGCATGA GGCGCGCAGCCTCGCGCTGGCCTCGCTCTTTGTCGAAGCCAGCGAGGCCGCGCGGCGTTTCTTTTTGCGCCAGGGATTTG CCGAGGACCACCGGCGCGATTTTGAGCGCCGAGGCGTCAGGATCCACAACTACGCGATGTCAAAGACGCTCTGA
Upstream 100 bases:
>100_bases TGCTCGAAGCGGTGCGGGCCGCCGGGATTTCAATCCGTGACGTCAAAACCGAAGAAGCCGACCTCGAGGATGTCTTCCTC GCACTGACAAAGTCCCGCTG
Downstream 100 bases:
>100_bases GGCTCAGCGCTCGATCCGGGCCTGATAGCAGTTGTTGCGTGCGGACCGGACGTGGATATAGCGCACATGCGGATCAGCAA AGATTTTCTCTGCCTGCGCC
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; Acetyltransferase YafP; Acetyltransferase Protein; GNAT Family Acetyltransferase; Acyltransferase With Acyl-CoA N-Acyltransferase Domain; Histone Acetyltransferase HPA2-Like Acetyltransferase; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL
Sequences:
>Translated_157_residues MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL >Mature_157_residues MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRIWVAADTQDVAQGFIELEPDG HIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEASEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.-
Molecular weight: Translated: 17810; Mature: 17810
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEE WVAADTQDVAQGFIELEPDGHIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEA EEEECHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL HHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHCCC >Mature Secondary Structure MLMQIRPFEPRDAVDWARIFHTAVHEVGARDYTPEQCAAWSPEPAPVDRVLERAQDGRRI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCCEE WVAADTQDVAQGFIELEPDGHIDCFYLAPDVAGAGIGASLYARLEHEARSLALASLFVEA EEEECHHHHHCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SEAARRFFLRQGFAEDHRRDFERRGVRIHNYAMSKTL HHHHHHHHHHHCHHHHHHHHHHHCCCEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA