Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yhjG [H]

Identifier: 99082464

GI number: 99082464

Start: 2757262

End: 2758869

Strand: Direct

Name: yhjG [H]

Synonym: TM1040_2624

Alternate gene names: 99082464

Gene position: 2757262-2758869 (Clockwise)

Preceding gene: 99082463

Following gene: 99082465

Centisome position: 86.14

GC content: 62.94

Gene sequence:

>1608_bases
ATGAACAAGATATTTGAGGTGCCGCTTTATCCATATGCGCGCCATGCGGATCAGGACGCGCAGCCACCGGCTCGGCACAA
GGTGGTCGTGGTGGGCGCGGGCCCAGTGGGCCTTGCCGCCGCCATCGACCTTGCCCAATCGGGAGTCCCCGTGGTGGTGC
TTGATGACAATGACAAGGTGAGCTTTGGCTCGCGGGCGATCTGTTTTGCCAAGCGCACGCTCGAGATCGCAGACCGGCTT
GGGGTTGGTCATGCCATGGCGGACAAGGGCGAAGAATGGAACGTCGGCAAGGTGTTTTTTGGCGACCGCAAGGTCTATGA
CTTCAACCTCCTGCCCGAAGACGGTCACCAGTTCCCGGCCTTTGTGAATCTGCAACAATACTACATCGAGGAATATCTGG
TGGACCGCGTCCGCGCGCTGCGGGACGAGGGCGCGCCGATTGAAATCCGGGGCAAGAACCGGGTCACGCATGTCGAGGAC
CTCGGCGGCCATGTGGCGCTCACCGTGGACACGCCCGACGGCGCCTACCAGCTTGAGACCGGGTGGCTGATCGCCTGTGA
TGGCGCAGGCTCGCCCCTGCGGGCGCAGATGGGGCTCGACTTTGTGGGCCGCGTCTTTGAGGACAACTTTCTCATTGCCG
ATGTGGTGATGGAGGCCGATTTCCCGACCGAACGCTGGTTCTGGTTTGATCCGCCCTTCAACAAGGGCCAGTCGGCGCTG
TTGCACAAACAGCCCGATGGCGTCTGGCGCATCGACCTGCAACTGGGCTGGGACATCGACAAGGAGGAAGAGAAACGCCC
CGAGAACGTGATCCCGCGTTTGAAGGCCATGCTGGGCGAGGACGTCCAGTTCGAGCTGGAATGGGTGTCGATCTACACCT
TTCAGTGCCGCCGGATGGAAAAGTTCCGCCACGGCCGGGTGATCTTTGCCGGCGATAGCGCGCATCAGGTCTCGCCCTTT
GGCGCGCGCGGGGCCAACTCCGGCCTGCAGGACACCGACAACCTGATATGGAAACTGAAACTGGTGCTCGATGGCGTGGC
CGATGAGAGCCTCCTTGAGAGCTACAACGCCGAGCGGATTGCGGCAGCGGATGAGAATATTCTGAACTCCTCGCGCTCCA
CCGATTTCATCACGCCAAAGTCCGACATGTCGCGCATCTTCCGCGATGCGGTTCTGGATCTTTCAGAACATCACAGCTTT
GCGCGGCCCCTGGTCAACTCGGGTCGGCTGTCGCTGCCCTCAGTCTATGATGGCTCGCGGCTCAATTCCGCCGACCGCCT
GCCCGGTGCCCCCACCCGCACGCGTCCCGGCGCGCCCTGCCCGGATGTGCCGCTGGAGGGGGGCTACCTGCTGCCGCAGT
TGGCGTCTGGCTTTACCCTGCTCGCCATCAATGCAGAGGTGCCCGACGGGTTTGAGGAAGCCGGGGTCTTTGTCCCGGCC
CTGCGCCTGAACGGCGAGGCCTCCGCGCCCCTCGCAGAGCGGTATCTGGGAGAGGCCAGTTCAGCCGTCTACCTCATCCG
CCCTGACCAACATGTCGCAACCCGGATGGACCATTTTGACCCGGCCCATTTCCACGCCGCCCTGCGCCGCGCCATTGGCA
AGGAGTGA

Upstream 100 bases:

>100_bases
TAGAGACACATCACAGCCATTGGCGGCCTTGACCGCCCCTGCACCGGTCCCCCACCGAGGGACCGGCCCAGTACCCGCTT
GCCCGGAGGGAGGAGACCGG

Downstream 100 bases:

>100_bases
TTTGCATGTCCGACGATCTGACCCTGACCCCGAACCTCGCACAGCCCGATGATGCCTATGCCCTCTTGCTCTCTGCCCAC
GAGGGTCTGAGCAAGGCGCA

Product: FAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDLAQSGVPVVVLDDNDKVSFGSRAICFAKRTLEIADRL
GVGHAMADKGEEWNVGKVFFGDRKVYDFNLLPEDGHQFPAFVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVED
LGGHVALTVDTPDGAYQLETGWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVMEADFPTERWFWFDPPFNKGQSAL
LHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRMEKFRHGRVIFAGDSAHQVSPF
GARGANSGLQDTDNLIWKLKLVLDGVADESLLESYNAERIAAADENILNSSRSTDFITPKSDMSRIFRDAVLDLSEHHSF
ARPLVNSGRLSLPSVYDGSRLNSADRLPGAPTRTRPGAPCPDVPLEGGYLLPQLASGFTLLAINAEVPDGFEEAGVFVPA
LRLNGEASAPLAERYLGEASSAVYLIRPDQHVATRMDHFDPAHFHAALRRAIGKE

Sequences:

>Translated_535_residues
MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDLAQSGVPVVVLDDNDKVSFGSRAICFAKRTLEIADRL
GVGHAMADKGEEWNVGKVFFGDRKVYDFNLLPEDGHQFPAFVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVED
LGGHVALTVDTPDGAYQLETGWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVMEADFPTERWFWFDPPFNKGQSAL
LHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRMEKFRHGRVIFAGDSAHQVSPF
GARGANSGLQDTDNLIWKLKLVLDGVADESLLESYNAERIAAADENILNSSRSTDFITPKSDMSRIFRDAVLDLSEHHSF
ARPLVNSGRLSLPSVYDGSRLNSADRLPGAPTRTRPGAPCPDVPLEGGYLLPQLASGFTLLAINAEVPDGFEEAGVFVPA
LRLNGEASAPLAERYLGEASSAVYLIRPDQHVATRMDHFDPAHFHAALRRAIGKE
>Mature_535_residues
MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDLAQSGVPVVVLDDNDKVSFGSRAICFAKRTLEIADRL
GVGHAMADKGEEWNVGKVFFGDRKVYDFNLLPEDGHQFPAFVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVED
LGGHVALTVDTPDGAYQLETGWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVMEADFPTERWFWFDPPFNKGQSAL
LHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRMEKFRHGRVIFAGDSAHQVSPF
GARGANSGLQDTDNLIWKLKLVLDGVADESLLESYNAERIAAADENILNSSRSTDFITPKSDMSRIFRDAVLDLSEHHSF
ARPLVNSGRLSLPSVYDGSRLNSADRLPGAPTRTRPGAPCPDVPLEGGYLLPQLASGFTLLAINAEVPDGFEEAGVFVPA
LRLNGEASAPLAERYLGEASSAVYLIRPDQHVATRMDHFDPAHFHAALRRAIGKE

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pheA/tfdB FAD monooxygenase family [H]

Homologues:

Organism=Escherichia coli, GI1786543, Length=376, Percent_Identity=25.7978723404255, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.-

Molecular weight: Translated: 59297; Mature: 59297

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDLAQSGVPVVVLDDNDKV
CCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCC
SFGSRAICFAKRTLEIADRLGVGHAMADKGEEWNVGKVFFGDRKVYDFNLLPEDGHQFPA
CCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCE
FVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVEDLGGHVALTVDTPDGAYQLET
EEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHCCCEEEEEEECCCCCEEEEC
GWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVMEADFPTERWFWFDPPFNKGQSAL
CEEEEECCCCCCEEHHHCHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCE
LHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRME
EECCCCCEEEEEEEECCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHH
KFRHGRVIFAGDSAHQVSPFGARGANSGLQDTDNLIWKLKLVLDGVADESLLESYNAERI
HHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHCCCCEE
AAADENILNSSRSTDFITPKSDMSRIFRDAVLDLSEHHSFARPLVNSGRLSLPSVYDGSR
ECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LNSADRLPGAPTRTRPGAPCPDVPLEGGYLLPQLASGFTLLAINAEVPDGFEEAGVFVPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCCEEEEEEECCCCCCHHHCCEEEEE
LRLNGEASAPLAERYLGEASSAVYLIRPDQHVATRMDHFDPAHFHAALRRAIGKE
EEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKIFEVPLYPYARHADQDAQPPARHKVVVVGAGPVGLAAAIDLAQSGVPVVVLDDNDKV
CCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCC
SFGSRAICFAKRTLEIADRLGVGHAMADKGEEWNVGKVFFGDRKVYDFNLLPEDGHQFPA
CCCCEEEEEHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCE
FVNLQQYYIEEYLVDRVRALRDEGAPIEIRGKNRVTHVEDLGGHVALTVDTPDGAYQLET
EEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHHHCCCEEEEEEECCCCCEEEEC
GWLIACDGAGSPLRAQMGLDFVGRVFEDNFLIADVVMEADFPTERWFWFDPPFNKGQSAL
CEEEEECCCCCCEEHHHCHHHHHHHHCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCE
LHKQPDGVWRIDLQLGWDIDKEEEKRPENVIPRLKAMLGEDVQFELEWVSIYTFQCRRME
EECCCCCEEEEEEEECCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEEEHHHHHHH
KFRHGRVIFAGDSAHQVSPFGARGANSGLQDTDNLIWKLKLVLDGVADESLLESYNAERI
HHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCHHHHHHCCCCEE
AAADENILNSSRSTDFITPKSDMSRIFRDAVLDLSEHHSFARPLVNSGRLSLPSVYDGSR
ECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
LNSADRLPGAPTRTRPGAPCPDVPLEGGYLLPQLASGFTLLAINAEVPDGFEEAGVFVPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCCEEEEEEECCCCCCHHHCCEEEEE
LRLNGEASAPLAERYLGEASSAVYLIRPDQHVATRMDHFDPAHFHAALRRAIGKE
EEECCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]